Gasterosteus aculeatus (three-spined stickleback): 120835020
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Entry
120835020 CDS
T07457
Name
(RefSeq) RNA-binding protein 15-like
KO
K13190
RNA-binding protein 15
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120835020
03041 Spliceosome [BR:
gat03041
]
120835020
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
120835020
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120835020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
SPOC
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
120835020
NCBI-ProteinID:
XP_040059421
UniProt:
A0AAQ4NS43
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Position
XVII:9092845..9099494
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AA seq
850 aa
AA seq
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MKGKERSPVKKRSRAPDDSRDRGGSHPGGKKSGALSTVGSNNGNGAASSRRSLHSEKRDT
RDSDGHNSAIRTSGGYDYGVVSGNKSYGGAEIDAETSRSDPRPPSNPENEYKTLKISELG
NQLNDEEIEDGLFHEFKRFGDVSVKISRENDARVAYVNFRRPDDARSAKHARGKLVLYDR
PLKIETVYTNRLTGRSPVLKDNFSPGHRHPHSQRPLSPTGMGYRDYRLQQLALGRLPPPP
PPLPPPAPPSQPLHVRDLERDRDFSAYDARNRPPFVPECALFREEDLITPEDDHRANRTL
FLGNLDVGVTESDLRRAFDRFGMITEVDIKRAVRGQSNTYGFIKFENLDMAHRAKVAMSG
KVVGHNPIKIGYGKPTPTTRLWVGGLGPWVPLAALAKEFDRFGTIRTIDYRKGEVWAYIQ
YESLDAAQAACTHMRGFPLGGPDRRLRVDFADTEHRYQHQQYVQLPLPLPHYDFVPEPFA
HRLADSVRGRDRSPPHPARFRDRGPYTSAEWSGVGVHDRMRGAIFDPVDRLDRRSHETWP
IERDLQGRDPSRKRRHLDDGSRRDRSPDNMDFGLRRHGNSLERSPGGSSRDGGRFSDPER
PVRSGKTSPVRERQNMGFGDKRRRTLSPALPSSCSDKDRKPKARDSSKSPAKKENRLEHL
IPAQSSRSEQQSKPAAGEQKLIQVWQGVLLLKNSSFPTSLHMLEGDLAVATSLLLKGSKG
GQASQLKISQRLRLDQPKVDEVSRRIKAAGSGGYAVLLAVPGKCEDAGIQEANSSAERPL
KNLVSYLKQKEAAGIIGLPVGGVRDKDHGGVLHAFPPCDFSQQFVDASAKAFAKSEDDYM
VMVIIKGASL
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaaaagagcggtcgccggtgaagaaacgctctcgggcgccagatgatagcaga
gaccgaggaggaagtcacccgggcggcaagaagagcggagccctgtcgacggtcggtagc
aacaacggcaacggcgcggcttcgtcccggagaagtttacacagtgagaagagagacacg
agggattcagacgggcacaattcagccattcggactagtggcggttacgactacggagtt
gtttcggggaacaagtcgtacggaggtgctgaaatcgacgcggaaacgtcgaggtccgac
ccgcggcctccgtcaaaccccgaaaacgagtacaagactctgaaaataagtgaactggga
aaccagctgaacgacgaggagatcgaggacggattgtttcacgagtttaagaggtttggc
gacgtcagtgtaaaaataagtcgagaaaacgacgccagggtggcgtacgtgaacttcagg
aggccggatgacgcccggtcggctaaacacgcgcggggcaagctggtgctgtacgaccgg
cctcttaagatcgagaccgtttacaccaacaggctcacgggccgctcgcccgttctaaaa
gacaatttctctccaggacaccggcacccgcactcccagaggcccctttctcccactggt
atgggatacagggactaccgattacagcagctggctctgggtcgcctccccccgccgccg
cctcctcttcctcctcctgcgcctccttctcagcccctccacgtcagggatctggagaga
gacagagatttttcagcgtacgacgccaggaacagacccccgttcgtccctgaatgtgcc
ttgttccgcgaggaggacctaataacccccgaggatgaccacagggcgaacaggactttg
tttctgggcaatctggacgtcggcgtgacggagagcgacctgaggagggcgtttgacagg
tttgggatgataacagaagtggacataaagcgggcggtgcgaggccagagcaacacctac
ggtttcatcaagtttgagaatctggacatggctcatcgtgccaaagtagccatgtcgggg
aaagtggtgggccacaacccaattaaaatcggatacggtaaacccacacccacgacgaga
ctgtgggtggggggcctcggaccctgggttccgctggctgcactagcgaaggagtttgac
cgcttcggtaccatcaggactatagactacaggaaaggtgaagtgtgggcttacatccag
tatgaaagtttggatgctgctcaggctgcgtgtactcacatgaggggctttcctcttggg
ggtcccgacaggcggctgagagtggattttgcggacacagagcaccgctaccagcaccag
cagtacgtgcagctccctctccccctgccgcactatgactttgttcctgagccctttgcc
caccgcctcgcagactccgtgagagggagggacaggtcgcctccacaccccgctcgcttc
agggaccggggcccgtacaccagcgccgaatggtcgggcgtgggcgtccacgaccggatg
cgaggagccatttttgatcccgtggatcgccttgaccggcgttcccacgagacctggcca
atagagcgggatttacaaggcagagatccgagccgcaaaaggagacatttggatgatggc
agtcgacgggatcgttcaccagacaacatggacttcggtctgcgccgccacggcaactca
ttagagcgcagccctggaggcagcagccgggatggcggtcgattcagtgaccccgaacgc
ccggttcgctccggcaaaacctcccctgtccgagagcgccagaacatgggctttggagac
aagagaagaagaacacttagcccggctttgcccagctcttgctctgacaaggaccgaaaa
cccaaagcaagggactcatccaagagcccagctaagaaggaaaaccgcttagaacatctt
atccccgctcagtcttcaaggtctgaacagcagtctaagccagctgccggagaacaaaag
ttgattcaggtgtggcagggcgtcctcctgctgaagaacagcagctttcccacgtccctg
cacatgctggagggggacctcgctgtcgccacaagtctgctgttgaagggctccaagggg
ggtcaagcgtcccagctgaagatcagccagcgcctgcgactggaccaacccaaggtagat
gaagtctcccgtcgcatcaaagccgccggctccggtggatacgccgtccttctggccgtg
cccgggaaatgtgaagatgcggggatccaggaagccaacagctcggccgagagacctctg
aagaacctggtgtcctacctgaagcagaaggaggcagccggcatcatcggcctcccggtg
gggggcgtccgtgataaggaccacggaggagtcctccacgctttccccccgtgtgatttc
tcacagcagtttgtggatgcctccgccaaagcctttgccaaatcagaggatgactacatg
gtgatggtcattatcaaaggagcatcattataa
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