Gasterosteus aculeatus (three-spined stickleback): 120835067
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Entry
120835067 CDS
T07457
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120835067 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120835067 (smarcc2)
03036 Chromosome and associated proteins [BR:
gat03036
]
120835067 (smarcc2)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120835067 (smarcc2)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120835067 (smarcc2)
PBAF complex
120835067 (smarcc2)
GBAF(ncBAF) complex
120835067 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
PaaA2
Motif
Other DBs
NCBI-GeneID:
120835067
NCBI-ProteinID:
XP_040059530
LinkDB
All DBs
Position
XVII:complement(10201110..10211482)
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AA seq
1053 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPVIYLSSDIEPKLLGKLKDIIKRHQGSVTEEKASGSHVVVS
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIQASEIEASVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTSDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYAKSKRGQREEEQEDPSKDLDEASPVPASEEGNPPKTN
STKKDSDSTPVKGGTEIEEQEDESMETTGKEEEEGSASVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQTPATQQMMSFPDKVKEKPADLQNFGLRTDMYSKKPCSAKSKNTSSSMREWTEQ
ETLLLLEGLEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDNSSSLGPLSYQPV
PFSQAGNPVMSTVAFLASVVDPRVASAAAKSALEEFSRMKEEVPAALVEAHVRRVEEAAR
VSGRQDPLYGLEGSGIAGTGLEEGERPDESSDESKSDNQPSEEKRESKESKDGATEEEEK
QSENGKKEEERGRDAEAERETDKTEAEIGNGKKVKDGKEGTEEGQREAESEGERKAKVEH
DIGEGNLATAAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELET
IMDREREALEYQRQQLLADRQSFHMEQLKYAEMRARQQHFQQIQHQQHSQAGGPHANQAA
PAPAPAPLTASQQAPNTPAPQPAPSPAPPSSSSASAPESQPPQGAHNSPPCPPGATPAPH
SSSSSSTTPVLHEPTPPLPGETLHPSAPVPPPQ
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaagaagtacatccag
gccgagccccccaccaacaagtctctgtccagcctggtggtccagctgctgcagttccag
gaggaggtgttcggtcgacatgtcagcaaccctccgctcaccaagctgccaatgaagtgt
tttctggacttcaagtcaggaggggctctctgccacatcctggcagctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtagagatgttcatgactattgagaagtccttagttcaaaacaactgccttagcaggcca
gtcatctacctgagctccgacatagagccaaaactgctcgggaaactgaaggacattata
aaaagacatcagggatctgtaactgaggaaaaggcctccggctctcatgttgttgtttct
attcccaccagcctggaggaagaagagtgggtgcgtccagtgatgaagagagataagcaa
gtgctccttcactggggatatttcccagacagttatgatacctggatccaagcaagtgag
attgaggcttctgtggaggatcctccgagcccagaaaagccgaggaaggtccatgccaag
tggattttagacctggaccagtacaacgaatggatgaatgaggaggactatgaggtgggc
gaggggtgcccaaagaggaagaggatctcagccaagacgctgacagatgaggtgaccact
tcagacgagcggagggacaagaagcccggcagcgccaagaagaggaagaggtcgccgtcg
ccgtcccccactcctccgcctcaggagagcaagaagaagaataccaaaaaagggccaacg
accccgtacgccaagtcaaaacggggccaaagggaagaggaacaggaggatcctagcaaa
gacctggatgaagcatcacctgttcctgcatcggaagagggaaacccacctaaaaccaat
agcaccaagaaggactctgattcaactccagtcaaaggcggaacagaaattgaagagcaa
gaggatgagtccatggaaacaacaggcaaggaggaggaggaaggctctgcgagcgtgaag
ggggaaccagtgaaaggctccgacctccacgaggacaatgtgaccgagcaaactcatcac
attattataccgagctacgctgcctggtttgactacaacagtgttcatgccattgagcgc
agagccctgcccgagtttttcaatgggaagaacaaatcgaaaaccccagagatttacctg
gcgtacaggaacttcatgattgacacataccggctgaaccctcaggaatatctgacatcc
acggcctgtcgcagaaacctggcaggagacgtgtgtgcaatcatgagagtgcacgccttc
ctggagcagtggggcctcatcaattaccaggttgactctgagagccgacccacacccatg
ggtcccccacccacttctcacttccacgtccttgcagacactccgtccagtctggtgccc
ctgcagcccaagacgtcccagacgcctgctacccagcagatgatgtccttcccagataaa
gtaaaggagaaaccagcagatctgcagaactttggtttgcggactgacatgtacagcaag
aagccctgttctgcaaagagcaagaacacatcgagctctatgagggagtggacagagcag
gaaacactgctactgcttgaggggttggagatgtacaaagacgactggaacaaggtttca
gagcacgtggggagccgtacgcaggatgagtgcatcctgcacttcctgcgactgcccatt
gaagacccttatttagaggacaactcgtcgtccctggggccgctgtcctaccagccggta
cctttcagccaggcaggaaaccctgtcatgagcacagtggccttcctcgcctctgtcgtc
gacccacgtgttgcctctgctgcagccaaatctgccctggaggagttttctcgtatgaag
gaggaggtccctgcagcgctggttgaggctcacgtgcggagggtggaggaggcagcgagg
gtcagcgggcgccaggatccgctgtatggcttggagggtagtggcattgcaggcaccggc
ctggaggagggagagagacctgatgaaagcagcgatgaaagtaagagtgacaaccaacca
agtgaagagaagagggagtccaaggagagcaaagatggagcaaccgaggaagaggagaaa
cagtcagagaatgggaagaaggaagaagaaagaggaagagatgcagaagcagagagggag
acggacaaaacagaggcagagattggtaatgggaagaaggtgaaggatggaaaagagggc
acagaggaaggacaaagagaagcagagagtgaaggagagaggaaagctaaggtggagcat
gatattggagaggggaaccttgccactgctgctgcgtctgcactcgctgctgcagctgtc
aaagccaagcatctggctgcagttgaagagaggaagattaaatctcttgtggccctgctg
gtggagacccaaatgaagaaactggagattaaacttcgacactttgaagaactggaaacc
ataatggacagagagagggaggccttggagtaccagcgtcagcagctgctggccgaccgt
cagtccttccacatggaacagttgaaatatgccgagatgagggcccgccagcagcacttc
cagcagattcagcaccagcagcacagccaggccggaggcccccacgccaaccaggccgcc
ccagcaccagccccagcacccctcaccgccagtcagcaggcacccaacacaccggcaccg
cagccggcccccagtcccgcacctccatcctcatcctccgcctcggcccctgagtcccaa
ccccctcagggggctcacaactcgcccccctgccctccaggcgcgaccccggctccccat
tcaagctccagctccagcactactcctgtactccatgaaccgacccccccccttcctggg
gaaacgctacacccttcagctccagtccctcctccacagtga
DBGET
integrated database retrieval system
