Gasterosteus aculeatus (three-spined stickleback): 120835230
Help
Entry
120835230 CDS
T07457
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00260
Glycine, serine and threonine metabolism
gat00630
Glyoxylate and dicarboxylate metabolism
gat00670
One carbon pool by folate
gat01100
Metabolic pathways
gat01200
Carbon metabolism
gat01230
Biosynthesis of amino acids
gat01240
Biosynthesis of cofactors
gat04981
Folate transport and metabolism
Module
gat_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120835230 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120835230 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120835230 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
120835230 (shmt2)
Enzymes [BR:
gat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
120835230 (shmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
120835230
NCBI-ProteinID:
XP_040059896
LinkDB
All DBs
Position
XVII:complement(5635096..5652557)
Genome browser
AA seq
502 aa
AA seq
DB search
MLSFALRRVTRPLCQRAPVRLAVRGQQSQAASPRMVDEDRPWTGHESLAEDDPEMWDLLL
KEKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQK
RALDSFNLDPALWGVNVQPYSGSPANFAVYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVK
RISATSIYFESMPYKLNTTTGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLC
TDIKAYMLADMAHISGLVAAAAVPSPFDHADLVTSTTHKSLRGVRAGLIFYRKGVRSVDK
KGKEIMYDLEDKVNFSVFPSLQGGPHNHAIAGVAVALKQAQSPLFKEYISQVLRNAKSMA
AALLSKGYTLVSDGTDNHLVLVDLRPKGIDGARAERVLELASITANKNTCPGDKSALTPG
GLRLGAPALTSRQFKEADFVRVVELMDEGFKIALDVKKKTGKLQDFKDFLLQDPETVARI
ADLRHRVEAFARPFPMPGFHDH
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgccctgagacgagtgacgcggccgctgtgccaacgagccccggtccgt
ctcgctgtgcgtggccagcagtcccaggccgcctccccccggatggtggatgaagatcgt
ccgtggacgggccacgagagcctggcggaggacgaccccgagatgtgggatctgctgctg
aaggagaaggaccggcagtgccgcggactggagctcattgcgtcggagaatttctgcagt
cgagcggctctggaggctcagggctcctgtctgaacaacaaatactctgaaggataccca
gggagaagatactacggtggagcggaggtggtggatcaaatcgagctgctgtgccagaag
cgcgccctggactcctttaacctggacccggctctgtggggggtcaacgtccagccgtac
tctggttcccccgctaactttgccgtctacacggcggtgctcaaaccgcacgaccgcatc
atgggcctggacctgcccgacggaggacatctgactcatggctacatgtccgacgtgaag
aggatctctgcaacctcaatctattttgagtccatgccctacaagctaaatacgacaacc
ggactcatagactacgaccagatggaaatgacggccaagctgttcaggcccaagctcatc
atcgctggcaccagcgcctacgcccgcctcattgactacgcccgcatcaagaagctgtgc
actgacatcaaggcctacatgcttgctgatatggcccacatcagcggcctggtggcagcc
gcagccgtcccctccccctttgaccacgcggacctggtcacctccaccacgcacaaatcc
ctccgaggagtccgggccggcctcatcttctatcgcaagggtgttcgctcagtggacaag
aaggggaaggagatcatgtacgacctcgaggacaaggtcaacttctctgtgttcccctcc
ctgcaaggtggaccacataatcacgccatcgctggtgtggctgtggcactcaaacaggcc
cagtcgcccttgttcaaggagtatatctcccaagtactaaggaacgccaagtccatggct
gcagctcttctcagcaaaggctacaccctggtatcagatgggaccgacaaccacctggtc
ctcgttgatctgcggcctaagggcatcgacggtgctcgggccgagagggtgctggagctc
gcgtcaatcaccgccaataagaacacctgccccggggacaagagcgccctgactcccggg
ggcctcaggctgggtgctccggccctgacgtccaggcagttcaaagaagctgactttgtg
cgcgtcgtcgagctcatggatgaaggcttcaagatcgccttggatgtcaagaagaagacc
ggaaagctccaggacttcaaggacttccttctccaggacccggagaccgtggctcgcatt
gccgacctgcgccatcgcgtcgaagccttcgcgaggcccttccccatgcccggcttccac
gaccattaa
DBGET
integrated database retrieval system
