Gasterosteus aculeatus (three-spined stickleback): 120835308
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Entry
120835308 CDS
T07457
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120835308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120835308
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120835308
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120835308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
Siva
zf-RING_10
zf-C3HC4_4
KH_DTX3L
DUF2254
zf-RING_4
Baculo_IE-1
zf-C2H2_4
DZR_2
Motif
Other DBs
NCBI-GeneID:
120835308
NCBI-ProteinID:
XP_040060090
LinkDB
All DBs
Position
17:10552022..10556488
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AA seq
567 aa
AA seq
DB search
MLQSWANNHNNKYSGDCNVLNILEDRIAVISLQPAPALSELQKLSGQQLVAKDGKMVTIS
AISLTPFEKQAPEEASGKVPPSSVSEHHDEEEQPSVQHRADPTEGEECTCPVPVNDFCYV
THIHKKEMERIAKENGVTITAEVLVTFKEGSMNGGPQKALSEFTTLVQSCESNGSIIPLK
EVNSDWKDTIKIQRMENKLLLTVSPEEMTIFGPSQSQEAFRKSLTPNTNTRPWLGESPVL
SQDTSLNNGMSTPDPLVIDGLTMEESYWKLITISFSNKLADIKTKFGVDFKESFTQPGKV
KVKTCYYKKSGGNMSMESHAVRALLHLYQKTATSPMNYARQPGAIGRTDSESDEASGGRG
FNGQSGYNTEAPAEGGATAGNSAEDKECPICKDTFNNKKQLRCKHEFCKECLDRSTMSMG
PICPVCKDVFGLMEGMQPPGNMTWTSCPDNVPGFKNCGSIIIHYNIFGGVQTKKHSNPGK
RFEGIQRTAYLPNNQEGKEVLHLLKKAFDQKLIFTIGTSVTTGMDNQVTWNDIHHKTSIT
GGPERFGYPDPGYLSRVKEELKAKGIK
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagagttgggccaacaatcacaacaacaaatactctggagactgcaatgtgttg
aatatcttagaagacaggattgcagttataagtcttcaacctgctccagcgctgagtgag
cttcagaaactaagtggacaacaactggtggcaaaagatggaaaaatggtcacaatatcg
gctatttctttgacaccgtttgagaaacaagcaccagaggaagcttcaggaaaggtccct
ccttcatccgtgtcagagcatcatgatgaggaagagcaaccttcggtgcagcatagagca
gaccctacagaaggagaggagtgcacttgtcctgtcccagtgaacgatttctgctacgtg
acccacatccacaagaaggaaatggaacgtattgcgaaagagaatggagttactatcacg
gcagaagtgcttgtgacgtttaaagaaggatcgatgaatggaggccctcaaaaagctctc
tctgagttcacaacccttgtccaatcttgtgaatcaaatggctcaattattcctctcaaa
gaagtgaattcagactggaaggacacaataaaaatccagagaatggaaaacaagcttctg
cttaccgtatcgcctgaagagatgaccatatttgggccaagtcaaagtcaagaagccttc
agaaagtctttaaccccaaacacaaacaccagaccctggttgggagagtctccagtgctg
tctcaagacacttccctgaacaatggcatgagcaccccagacccgcttgtcattgatggc
ctgaccatggaggagagctactggaaactgataaccatttccttcagcaataaattggct
gatatcaaaactaagttcggtgtggactttaaagaatcgtttacccaaccgggcaaagtc
aaagtcaaaacttgctactacaaaaaatctggaggaaacatgtcaatggagagccacgct
gtcagggctcttcttcatctgtaccagaagactgcaacatcacctatgaactatgcccga
caaccgggtgccattggacggactgactctgagtcggacgaagcctccggtggacgtggg
ttcaatggacagtcgggatacaacactgaagcacccgcagaaggcggagcaacagcaggc
aactcagcagaagacaaagagtgtcctatatgcaaagatacatttaataataagaagcag
ctcaggtgtaaacatgaattttgtaaagaatgcctggatagatcaaccatgagcatggga
cccatctgtccggtttgcaaagacgtcttcggtctgatggagggaatgcagccaccaggg
aatatgacgtggacttcatgtcccgataacgtccctggattcaaaaactgtggcagtata
atcatccactataatatattcggtggagtacagacgaagaagcattcaaatcctgggaag
cgttttgaaggtattcaaagaaccgcatatctgccaaataaccaagagggcaaagaagtg
ctgcacctgttaaagaaagcgtttgaccagaagctcattttcactattgggacgtccgta
acgactgggatggacaatcaagtgacctggaacgatattcaccacaaaacctctattact
gggggaccagagaggtttgggtaccctgatcctggctacctgagcagagtcaaagaggaa
ctgaaggccaaaggcatcaagtga
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