Gasterosteus aculeatus (three-spined stickleback): 120835412
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Entry
120835412 CDS
T07457
Symbol
arhgef10la
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120835412 (arhgef10la)
03036 Chromosome and associated proteins [BR:
gat03036
]
120835412 (arhgef10la)
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120835412 (arhgef10la)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120835412 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
SOS1_NGEF_PH
IQ_SEC7_PH
RHG20_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
120835412
NCBI-ProteinID:
XP_040060255
LinkDB
All DBs
Position
XVII:2489187..2546768
Genome browser
AA seq
1015 aa
AA seq
DB search
MKAARSGTKDGLEKTKIAVMRKVSFLQRKDQLEEEDDAGYLDVAMSEMKHPPPQLSPMPE
GLTNHQVVRRHILGSIIQSERSYLESLRRIGQEYQRPLMEADPRILSPRKLRPIFYRMRE
ITQCHSMFQIALASRVAEWDSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKAC
LSKPAFLEFLKKKQATSVDRITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPLQL
ALTELETLAEKLNEQKRVADQIAETRQLARSVSDRLLSKQLNSEQGSLVLCETLIETVYG
ERGQVLKSKERKVFLFDDVLVCANINVKGPPDVSSLVPVGPKYTMKWSAPLQQVQVVEVG
QEVSQSQDALFQQSGAKRAGPPGKAFLGPPRLYQELQELQHDLSVVEEVTLLVGTLQGTY
QNLNTTVAQDWCLALQRLIRMKEEQIQSANKCRLRLQVPGRPDKSGRPVSFMVVLNTPSP
VSKISWVNRLHLAKIAQREENSPGWVCGQDEGKSIAPFWCPLLACHMPVFATKSPDRKLE
AALHNPVHCALLGFSAASTSLPQGYFWVAGGDGAHGQIEIFSLNRPTPRTVKSLPVDAAV
RCLEYVPEPSPSEEAEAGVHKASGVGASICVGLDDGRVLVYGSVDTAAQCLLTLAAAEGS
PVLCLKHSARFLFAGLRSGALMVYGRKEDDALWDPDSCRCVKLGSQPVRTLLVLDDSVWA
SCGNSVTVVDVSSLSTQTFEVHPDPMISVAHTACAGGGVWMAFSEGSSIRLFHTETLELL
QEINVSTRSTLLNTGQKSVRVTSLLICQGLLWVGTPQGLIITLPVPKLEGIPKITGKGMV
SLNAHRGPVDFLAATSGTLSPELLKRDSVADGPDSAFGGDASSQESLQHCYQGEGRGKGR
GVLLQYKLRSTSGLPGQPLTAAGGDAAASDSSLESLEHSVEDGSIYELSDDPEMWVRGRP
CERDGGRRDRVVSAAVISGGKGFRRLKEGAAAAGAPSGGEGLENVLMVWQLPLTV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggcgaggagcgggacgaaggatgggctggaaaagaccaagatagccgtcatg
cgcaaagtttccttcctgcagagaaaagatcaattggaggaggaggatgatgcagggtac
ctggatgtggccatgtcagaaatgaagcatcctcctccccagctgagccccatgccggag
gggctgaccaaccaccaggtcgtcagacgccacatcctcggctccatcattcagagcgag
cggagctacctggaatctctccggagaatcgggcaggaataccagaggccgctgatggag
gccgatccacgcatcttgagcccgaggaagctgcggcctattttttacagaatgagggag
atcactcagtgccactccatgtttcagattgcgctggcgtcgcgcgtggctgagtgggac
agcagcgagaaaatcggagacttatttgttgcctcgttttccaaatccatggtgctggat
gtttacagcgactacgtgaacaacttcaccaatgccatggcgctgattaagaaggcgtgc
ctgtccaaacccgcgttcctggagttcttaaagaagaagcaagcgaccagtgtggaccgg
atcactctctacggcctgatggttaagcccattcagcgattccctcagttcatattgctc
ctgcaggacatgctgaagaacacgccgaagggccacgtggaccgcctgccgctgcagctc
gccctcaccgagctggagacgctggccgagaagctcaacgaacagaagcgggtggccgac
cagatcgccgagacccggcagctcgcccgcagcgtcagcgaccgcctgctcagcaagcaa
ctgaactcggagcaggggtcgctggtgctttgtgagacgctcattgagacggtgtacggc
gagaggggacaagtcctgaagtcgaaggagagaaaggtcttcctctttgatgatgtgctc
gtctgcgccaacataaatgtcaaggggcctccggacgtcagcagcctggtccccgtcggc
cccaagtacaccatgaagtggagcgcccccttgcagcaggtgcaagtggtggaggtgggc
caggaggtctcccaaagccaagacgccctcttccaacagagcggggccaagcgagccggc
cccccaggcaaggcgttcctcggccccccccggctctaccaggagctgcaggagcttcag
catgacctttccgtcgtggaggaggtcaccctcctcgtgggcactctgcaggggacgtac
cagaacctgaacaccactgtggcccaggactggtgtctggctctgcagaggctcatccgc
atgaaggaagagcagatccagagcgccaacaaatgtcgcctacgcctgcaggtacccggc
agaccagacaagtccgggcgtcccgtcagtttcatggtggtcctcaacacccccagcccc
gtcagcaagatctcctgggtcaaccgtctgcacttggccaagatcgcacaacgggaggag
aactcgcccgggtgggtgtgtggacaggacgaagggaagagcatcgccccgttctggtgt
ccgctgctcgcctgtcacatgcccgtctttgccacaaagtccccggaccgaaagcttgaa
gctgccctccacaacccggttcactgtgcgctgttgggcttctccgcagcgagcacctcc
ttacctcaaggctacttttgggtggccggcggagacggcgcgcacggacagatcgagata
ttttccctcaacagacccacgccgaggacggtcaagagcctgccggtcgacgccgccgtc
cgctgtctggaatacgtgccggaaccttctccgtctgaggaagcggaggccggagtccac
aaggcctccggggtcggcgccagcatttgcgttgggttggacgacgggcgcgtgctggtg
tacggcagcgtggacacggcggcgcagtgcctgctgaccctcgccgccgccgagggctcc
cccgtgctgtgcctcaagcactccgcccgcttcctgttcgccggcctgcgcagcggcgcc
ctgatggtctacgggaggaaagaggacgatgctctgtgggacccggactcgtgcagatgt
gtaaaactgggctcgcaaccggtgcggactctgctggtgttggacgactcggtgtgggcg
agctgcgggaactcggtgaccgtggtggacgtctccagtctcagcacccagacgtttgag
gtccaccctgacccaatgatcagcgtcgcgcacacggcgtgcgccggcgggggggtgtgg
atggcgttctccgagggttcctccatccgtctctttcataccgaaacgctggagcttctg
caggagatcaacgtgtcgacgcgttcgacgctgctgaacacgggtcaaaagagcgtgcgg
gtcaccagtctcctgatctgccaggggctgttgtgggtgggcacgccccagggcttaatc
atcaccctgccggttcccaaactcgagggcatccccaaaataacagggaagggaatggtg
tctctcaacgcccaccgcgggccggtggacttcctggcggccaccagcggcaccctgtcc
cccgagctgctgaagagggattcggtcgcggacggtccggactcggccttcggcggcgac
gcctcctcccaggagtccctgcagcattgctaccagggggagggacggggcaaagggcgc
ggcgtcctgctgcagtacaagctgcgctccacctcgggactccccgggcagccgctgacg
gcggcggggggcgacgcggcggcgtccgactcctccctggagtccctggagcacagcgtg
gaggacggctccatctacgagctcagcgacgaccccgagatgtgggtgcgggggcgtccc
tgcgagagggacgggggacgcagggacagggtggtctcggcggcggtcatctccgggggg
aagggcttccgcagactgaaggaaggagccgcagcagcaggcgccccgagcggcggggag
ggtttggagaacgtcctcatggtgtggcagctcccgctgacagtgtga
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integrated database retrieval system
