Gasterosteus aculeatus (three-spined stickleback): 120835471
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Entry
120835471 CDS
T07457
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120835471 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120835471 (cstf3)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
120835471 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
TPR_6
TPR_19
Motif
Other DBs
NCBI-GeneID:
120835471
NCBI-ProteinID:
XP_040060387
UniProt:
A0AAQ4S9F0
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Position
II:13155506..13165193
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AA seq
716 aa
AA seq
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MTTEGAADQAAAEYIPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVT
QFPSSGRFWKLFIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINVHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPP
QNSPQEAQQVEMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDVWYEAAQ
YLEQSSKLLAEKGDMNNSKLFSDEAANIYERAIGTLLKKNMLLYFSFADYEESRMKYEKV
HSIYNKLLGIEDIDPTLVYIQYMKFARRAEGIKSGRIIFKKAREDLRTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYILAYIDYLSHLNEDNNTRVLFERVLTSGSLSPE
KSGEIWARFLAFESNIGDLASILKVERRRFTAFKDEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLAALLPETVVTPSAPAQKDEADRKPEYPKPDTNQMIPFQPRHMAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPTCFTGPFVQVDELMETFRRCTLPETVDAAVELIT
GRQPDTGGEGNGPMENHAVAKSLKRPNADSDEEDDKGAVAPPIHDIYRSRQQKRIR
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagggagcagccgaccaggcagcagcagaatatattccggagaaggtgaag
aaggcagagaagaagttggaagaaaacccatatgaccttgacgcatggagcattctgatt
cgagaagcacagaaccaacccatagataaagcaaggaagacatatgagcgccttgtcacg
cagttcccaagttctggcagattctggaaacttttcattgaagccgagatcaaggctaaa
aactatgacaaggtagaaaagttgtttcagagatgcctgatgaaggtgttgcacattgac
ctgtggaaatgttacctctcatatgttcgggagaccaaaggaaagctgcccagctacaaa
gagaagatggcacaggcatatgactttgccctcgataaaattggcatggaaattatgtct
tatcagatttgggtggactacatcaacttcctcaaaggagttgaagctgtgggctcatac
gcagagaaccaacgcatcactgcggtgcggagggtctaccagagaggctgcgtcaacccg
atgatcaacatcgagcagctctggagagattatagcaaatacgaggagggaatcaatgtt
cacctggccaaaaagatgatcgaggaccgaagtagggactacatgaatgccaggagagtg
gccaaggagtacgagacggtgatgaagggactggacaggaatgcgccctctgtaccgccg
cagaactcccctcaggaagcccagcaagtggaaatgtggaagaagtacatccagtgggag
aaaagcaacccgctgcgcacagaagaccagaccctcatcactaagagagtgatgtttgcc
tacgagcagtgcctgctggtgctgggccaccatccggacgtttggtatgaggcagcacag
tacctggagcagtccagcaagctgctggcagagaaaggggacatgaacaattccaagctg
tttagtgacgaggcagctaacatctacgaacgcgccatcgggactcttctgaagaagaac
atgctgctgtacttttcattcgcagactatgaagaaagtcgcatgaagtacgagaaggtc
cacagcatctacaacaagctgctggggatcgaggacatcgaccccacgctagtctacatt
cagtacatgaagttcgccaggagggcagaaggcatcaagtcgggtcgcatcatcttcaaa
aaggcccgtgaggatctacgcacgcgccaccatgtgtatgtgacggcagcactgatggaa
tactactgcagcaaggataaatctgtggccttcaagatctttgagcttggtctgaagaag
tacggtgacatcccagagtacatactggcatatattgattacctctcccatcttaatgag
gataacaacaccagggttctgtttgagcgtgtcctcacctcgggaagcttgtcgccagaa
aagtccggcgagatctgggctcggttcctggcttttgagagcaacataggagacctggcc
agtatcctgaaagtggagcgcaggcgattcacggccttcaaggacgagtacgagggcaag
gaaacggccctgctcgtagaccgatacaagttcatggacctgtatccctgctccgccagt
gaactcaaggcccttggatacaaggacgtgtctcgtgccaaactggcagcgctgctccca
gagaccgtggtgacgccctcggcgccggcacaaaaggacgaagcagaccgcaaacccgag
taccccaaacctgacaccaaccagatgatccccttccagccccgtcacatggcccctcca
ggtttacaccctgtccctggtggcgttttcccagtgcccccagctgctgtggtcctaatg
aagctgctccctccgcctacgtgcttcactggaccctttgttcaagtggacgagctcatg
gaaactttcaggagatgcacacttcctgagactgttgatgctgctgtagagcttatcact
ggccgacagcccgatacaggaggggagggcaatggacccatggagaaccacgctgttgcc
aagtcactaaagaggccaaatgcagattccgacgaagaggacgacaaaggagccgtggct
ccacccattcacgacatctaccgctcgcgccaacagaaaaggatccgataa
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