Gasterosteus aculeatus (three-spined stickleback): 120835536
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Entry
120835536 CDS
T07457
Symbol
zgc:113307
Name
(RefSeq) LOW QUALITY PROTEIN: lumican
KO
K08122
lumican
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gat00535
]
120835536 (zgc:113307)
Proteoglycans [BR:
gat00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
120835536 (zgc:113307)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
LRR_14
Motif
Other DBs
NCBI-GeneID:
120835536
NCBI-ProteinID:
XP_040060491
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Position
XVII:11249903..11255965
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AA seq
370 aa
AA seq
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MSPAVSMALKYLAVLLLVCVFDSASATVVADLDTDYGGVPVRISRLLGEPSVXRLQGRMD
AAWFRANNPQACPQQCDCPIQWPTALYCDHKGLADIPDSLPNRTQYLFLQANNISSLSSS
FLTKLTALRWLILDHNQLQELVALQTQTQMYYFFANHNHLRSVPSTLPAGLKELRLAHNQ
ISSISPGAFQNLQNLTLLLLQGNRLQTIVEGDLKGLLSLHLLDLSGNLFLAVPRNLPPSV
QQLYMSNNTLIGLDEDSLRGFLKLKYLRLSHCGLQSSNVYQQVFNFTSLVELDLSHNKLK
TIPTVATTLQYLYLEANEIQDFNVNSFCRHWGPLSYSRMKILRLEGNKISYQQLPSNWVF
CLRVLESIYI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccagctgtctctatggctctcaagtacctcgctgtgttgctgctggtgtgtgtt
ttcgactcagcctcagcgactgttgtagccgacttggacacagactatggaggtgtccct
gtgcggatcagccgtcttcttggtgagcctagtgtgnnacgtctgcagggacggatggac
gcagcctggtttcgagccaacaacccccaggcctgccctcagcagtgtgactgccccatc
caatggcccacggcgctctactgtgaccacaaaggcctggcggacatccctgacagcctg
ccaaacagaactcaatacctttttcttcaggccaacaacatctcgtccttgtcttcctct
tttctgaccaaacttactgctctacgctggctcatcctggaccacaatcaactgcaggaa
ctggtcgcgctgcagacacagacccagatgtactacttttttgccaaccacaaccacctg
cgatcggtgccaagcactctacctgctggactcaaggagttgcgactggcccacaaccaa
attagcagcatcagtcctggagctttccagaacctgcagaacttgacactgttgctgctg
cagggaaacagactgcaaaccatcgtggagggagacctcaaaggtcttttgagtctgcac
ctgctggacctaagtgggaatctgttcttggctgtccccagaaatttacccccttctgtc
cagcagctctatatgtccaataacactctcatcgggctggatgaagacagtttaagggga
tttctcaaactcaagtatcttcggctaagtcactgtggtcttcagagcagcaatgtctac
cagcaagtcttcaacttcaccagcttggtggaactggacctttctcataacaaacttaaa
actattcccacagtcgccaccactctgcagtacctctacctggaggccaatgaaatacaa
gatttcaatgtgaacagtttctgcagacattggggacctctgtcctactccaggatgaag
atcttacgattggagggaaacaaaatatcctaccaacagctgccatccaactgggtcttt
tgcctgcgagtgctagaaagtatttatatttga
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