Gasterosteus aculeatus (three-spined stickleback): 120835635
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Entry
120835635 CDS
T07457
Symbol
nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120835635 (nisch)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
120835635 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_6
Motif
Other DBs
NCBI-GeneID:
120835635
NCBI-ProteinID:
XP_040060654
UniProt:
G3NIW7
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All DBs
Position
XVII:complement(2024126..2039019)
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AA seq
1503 aa
AA seq
DB search
MEPASFPEELSERKVCVVGSELVENYTVYVIEVSDGEHRWTVKHRYSDFHDLHEKLTAEK
KVDRGLLPPKKMLGKNSKSLVERRQKELELYLQTLLLQFPHSSPTALASFLHFHLYEING
ITAALAEELFHKGEMLLQAGEVFSLRPLQLYSVSQQLRLAKPTCCNGDAKTDLGHILDFT
CRLRYLKVSGTRGPVGTSNIHESSLPYDLSVFKALLQIEISECSSQQIRGLSSLRSSLAT
LSLHHSTETMMSILVPEASEFSQWEAEGAESGCPVTAVIPVWRNLTTLDMSHNGISTIDD
SVKLIPKVEFLDLSHNQLSTVENLQHLYNLVHVDLSYNSLRVLEAAHTRLGNIKTLSLAG
NQLDRLSGLSKLYSLVNLDLSHNQLAQLEEIRSIGSLPCLEKLNLSSNPMCIIPDYRTKV
LTQFGDRAAEVCLDGAVTSEKELDTVEVLKAIQKAKEVKDRMSSSDKKISEETKLSAAAA
PAHPSPPPSSSSRCSSAVAAPAVSSSSSSSSSSSSSSCLAQQPACPSQEVTSREEEDDVP
GAVVPPGDAAPPPASTDTKTRLLTAAAAQVQQAAVSLSEQTLCGAPATNHFSCLCCSSSP
KPPETRCSSCSAASFPLLPSHLLSLSSSNKDFITQLSQRLSATLKEQKRETNNEEEEEDD
EEEQRKEQREEQNVSELEVQSNVEDTQVESPSPGSVDGYFEMGLNDSVEESVGSSSSTSL
ALLPAEEPGGRRGDLCGEEEEEEEAGQVTRVLWCYCLQVKEEVEQKEACLVLTDRLLGLL
YLSPDFKRTNQDADQEQRPLVEEVLSSLQVDLLLPYPQLLLSRSPDLPGSCLSFALRSGP
TRWYLFSEGEELRRTRAELTVLMEAVKSEPKPPDSPRLLPPSLLSSWELEESRGAQGGYP
AFLLLCSSSSSPPGTHPLLSDLLSERKDAGLLFLTHRHLWVLKMDFRELAERERSSEDLH
PSSFSSSGCRLVRVPLGSVVLHPRERASQVGAGTSNPSCPDPKHPHRRRHAVELLLAGHR
LLLLFPLAQNRSSFLGLLSQRRASLEGLKMVALPQTCRPCARQGRLRSRDQCCGSSSRDS
NSSCQVEENQPSLHLHPGLSPGLKLLAGLRGEQLLTYFHRYIAMSEAEEVRQVLWLSVVL
YKSPGSELTCCLLLSTDTIYFLLEDSASTLDHHPVLDTMDSGDADVRLCCCLSVGLSDLL
SVNVGLFDQHFRVVGRSAHHIVCCLSRDSYGTGVFLRELMSALSLLQQQLPPPEPSDQDF
YSQFTDTSTGKMQNYELVHSSKVKFIYPSEEEMGDLTFIVAERKAAGSAPSSSSRSFNVL
LYLLVFQVQMPGGLPSHGSTLSGPSPSVSGSGPSPVLQPRTLILTSTDVFLLEEDYVSYP
LPDFAKEPPSRDRYQLREARRIRDLDRVLLGYQTYPQALTLVFDDLPGPDLLCHLTMDHF
ATAAGEGEEALPRGGGGASSGAEGEVQWCVFVPEAESRERLISLLARQWEALCSRELPVE
LTG
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgcctcttttccagaagagctttcggagagaaaagtgtgtgtcgtcgggtcg
gagctggtggaaaactacactgtctacgtcatcgaggtgtcggatggggagcacagatgg
accgtgaagcaccgctacagcgacttccacgatctccacgagaagttgacggcggagaag
aaagtggaccgagggctgcttcctccaaagaagatgctggggaagaactcaaagagtctg
gtggagcggcggcagaaggagctggagctctacctgcagacgctcctgctgcagttcccg
cactcctcgccgactgcgctcgcctccttcttgcactttcacctctacgagatcaacggc
atcacagccgcgctggctgaggagttgtttcataaaggcgagatgttgctgcaggccggc
gaggtgttctccctcagaccgctgcagctttactccgtctcccagcagctccgtctggcc
aagccgacctgctgcaacggagacgccaaaaccgacctgggacacatcctggacttcacc
tgcaggctgcgatacctcaaggtttcgggaacccgaggcccagtgggaaccagtaacatc
cacgagagcagcctcccctacgacctgtccgtcttcaaagcactactccagatagagatc
agtgagtgcagctctcagcagattcgaggtctgtcgtctctgaggtcgagtctggccact
ctgagtctccaccactccacggaaaccatgatgtccatcctggtcccggaggccagcgag
ttctcgcagtgggaggctgagggggcggagtctggctgtccggtcaccgctgtcattccc
gtgtggaggaacctgaccacgctggacatgagccacaacggcatcagcaccatcgacgac
tcggtgaaactgattccaaaggtggagtttctggatctgagccacaaccagctgtccacc
gtggaaaacctgcagcacctgtacaatctggtccacgtggatctgtcctacaacagcctg
cgggtcctggaagcggctcacacccgtctgggcaacatcaagactctgagcctggccgga
aaccagctggaccgactgagcggcctcagcaagctgtactcgctggtcaacctggacctc
agccacaaccagctggcccagttggaggagatcaggagcatcggatcgctgccgtgtctg
gagaaactcaacctgtccagtaaccccatgtgcatcatcccggactacagaaccaaagtg
ctgacccagtttggagaccgcgcagcagaggtttgtctggacggtgcggtgacctcggag
aaggagctggacacggtggaagtgttgaaagcaattcagaaagccaaagaagtcaaagac
cggatgagcagcagcgacaagaagatcagtgaggagaccaagctgtctgctgctgctgca
cctgctcacccctctcctcccccctcctcttcctcccgctgctcctctgctgttgctgct
cccgctgtctcctcctcctcctcctcctcctcctcctcctcctcctcttcctgtctggcc
cagcagcctgcctgccccagccaagaagtgacgagcagagaagaagaagacgacgttccc
ggcgctgtcgtccctcctggggacgctgctcctccccccgcgagcactgacactaaaaca
cgcctcctgactgctgccgccgctcaggtccaacaagctgctgtcagtctgtctgaacaa
acactctgtggagctcctgctaccaatcacttcagttgtctctgctgctcttcctcccca
aaaccacctgaaaccaggtgctcctcctgcagcgctgcctcgtttcctctgcttccttct
cacctgctctccctctcctcctccaacaaagactttatcacccagctctcccagcgcctc
agcgccaccctgaaggagcagaagagggagacgaacaatgaggaggaggaggaggatgat
gaggaggaacagaggaaggaacagagggaggaacagaatgtgtctgaattggaagttcag
tccaatgtggaggacacccaggtggaaagtccaagtccaggctccgtggacggctacttc
gagatgggtctgaacgactcggtggaggagtctgtcggctcctcttcctccacgtctctc
gctcttcttcccgcggaggagcccgggggccgccggggggacctgtgtggcgaggaggag
gaggaggaggaggcggggcaggtcaccagggttttgtggtgctactgtcttcaggtgaag
gaggaggtggagcagaaggaggcgtgcctggtgctgactgaccggctgttgggcctcttg
tacctgtcacctgacttcaaacggaccaatcaggacgcagaccaggagcagaggccgctg
gtggaggaggtgctgtccagcctacaggtggacctcctgctgccgtacccccagctgctc
ctctcccgcagccccgacctccccggctcctgcctctccttcgccctccgctccggtccg
acccgctggtacctcttctccgagggggaggagctgcggcgcaccagggcggagctgacg
gtgctgatggaggctgtgaagtctgagccgaagccccccgactctcctcggctcctcccc
ccatcgctcctcagctcctgggagctggaggagagtcggggagcccagggaggctatcct
gccttccttctcctttgctcctcctcctcctcccccccggggacccacccgctcctgtca
gacctcctctcagagaggaaggacgccggcctcctcttcctcacccacagacacctctgg
gtgctgaagatggacttcagagagctggcagagagagagaggagcagcgaggaccttcac
ccctcctccttttcctcttctgggtgcaggctggtccgcgttcccctcggctccgtggtg
cttcaccccagagagagagcttctcaggtgggggctggaaccagcaacccctcctgcccc
gacccaaagcacccccacaggaggcgtcacgcggtggagctgctgctggctggtcacagg
ctgctgctgctcttccctctggcccagaacaggagctccttcctggggctgctgagccag
aggagagcctccctggaggggctgaagatggtggccctgccccagacctgcaggccctgt
gcccggcaaggccggctcagatccagagaccagtgctgtggttccagttcgagggactcc
aacagcagctgtcaggtggaggagaaccagccctcccttcacctccacccaggtctctcc
ccgggactgaagctcctggccgggctcagaggggagcagctcctcacctacttccacaga
tatatagcaatgtctgaggcggaggaggtgagacaggtcctctggctgtctgtggttctc
tacaagtctccaggctctgagctcacctgctgtctgctgctctccacggatacaatctac
ttcctgctggaagactccgcctccacactggatcatcacccggtgttggacacgatggac
tccggggacgcggacgtccgtctgtgctgctgtctgtccgtcggactgtccgacctgctg
tcggtcaacgtgggactgttcgaccagcacttcagagtcgtgggccggtcggcccaccac
atcgtgtgctgtctcagccgggacagctacgggacgggcgtcttcctccgggagctcatg
tcggccctcagtctgctgcagcagcagcttccccctccggagccgtcggatcaggacttc
tactcccagttcaccgacaccagcaccggaaagatgcagaactacgagttggtccacagc
agcaaggtgaagttcatttacccgagtgaggaagagatgggagacctgaccttcatcgtg
gctgagaggaaggctgcaggcagcgcgccgtcctcctcctctcgctccttcaacgtcctg
ctgtacctgctggtcttccaggtccaaatgcccggcggtcttcccagccacggctccacc
ctctcaggcccctccccctcggtttccggctccggtccgtcgccggtgctccagcccagg
actctgatcctgaccagcaccgacgtgttcctgctggaggaagactacgtcagctatcct
ctgccggatttcgccaaagaaccaccttccagggaccgctaccagctccgggaggcccgg
aggatccgggacctggaccgggtcctgctggggtaccagacttacccccaggctctcacc
ctggtcttcgacgacctgcccggccccgacctgctctgccacctcaccatggaccacttt
gccaccgcggcgggggagggggaggaggccctgcccagaggggggggcggagccagcagc
ggcgcggagggagaggtgcagtggtgcgtcttcgtcccggaagccgagagcagagagagg
ctcatctccctcctcgcccgccagtgggaggcgctgtgcagccgggagcttcctgtggag
ctcacggggtga
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integrated database retrieval system
