KEGG   Gemmatimonas aurantiaca: GAU_0088
Entry
GAU_0088          CDS       T00878                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gau  Gemmatimonas aurantiaca
Brite
KEGG Orthology (KO) [BR:gau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gau02048]
    GAU_0088 (hsdR)
Enzymes [BR:gau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     GAU_0088 (hsdR)
Prokaryotic defense system [BR:gau02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   GAU_0088 (hsdR)
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: BAH37130
UniProt: C1A3Q3
LinkDB
Position
complement(103251..106322)
AA seq 1023 aa
MRASSDKNYPLDGASPKAVREGTIEQGFIGTLEGLKYEYRPDIRDRAALERNFREKFETL
NRVRLTDSEFARLLDEIVTADVFTAAKTLREINAFTRDDGTPLNYSLVNLKDWCKNSFEV
INQLRINTDNSHHRYDVLLLINGVPCVQVELKTLGINPRRAMEQIVEYKNDPGNGYTKTL
LCFLQLFIVSNRHRTWYFANNNTRHFAFNADERFLPIYEFADEANTKITHLDDFAARFLQ
KCALGKTLSRYMVLIQSEQKLMIMRPYQVYAVQQIMQCIEDNAGNGFIWHTTGSGKTLTS
FKASTLLKQNEHIHKCLFVVDRKDLDRQTREEFNRFQEGSVEENTNTAALVRRLRSEDYA
DKVIVTTIQKLGLALDADSKRNRQRKRNDQPTFKELLEPLQDQRIVFIFDECHRSQFGEN
HQAIKEFFPRAQLFGFTGTPIFEENASLQKIEDTTASMRTTEDLFQKRLHAYTITNAIED
GNVLRFHVDYFKPREEAGKKAPRPGEGIAKRAVIEAILAKHDTATAGRRFNAILATASIN
DAIEYYGLFKAMQAERQAADPERTPLNIACVFSPPADGDRDVQQIQEDLPQEKLDNEQDP
EGKKAALKGILAEYNARYGTNHAIGEFDLYYQDVQKRIKDQQWPNSDFSHAQKIDITIVV
DMLLTGFDSKYLNTLYVDKNLKHHGLIQAFSRTNRVLNGSKPYGNILDFRQQQDAVDAAI
ALFSGEQTGEQAREIWLVDKAPVVIQKLQAAVQQLDSFMRSQGLETAPEAVPNLKGDAAR
AVFIERFKEVQRLKTQLDQYTDLTDGDKVAIEQVLPDAQHRGFKGAYLETAQRLREQQGK
TRGDDMADSKAADQLDFEFVLFASAVIDYDYIMGLIARYTAQGPSKSKMTRDQLIGLISS
DAKFMDEREDIAEYIGTLKAGEALNETAIREGYTRFKVEKSVAEVAALAEKHGLTADELQ
KFVDGTLERMIFDAERLGDLFAPLDLGWKARKDAELDLMGELYPLLTRRAQVREISGLSA
YEQ
NT seq 3072 nt   +upstreamnt  +downstreamnt
gtgcgcgcctcctctgataagaactacccactcgacggcgccagtcccaaggcagtccgt
gagggcacaatcgaacaaggattcatcggcacgcttgaaggcctgaaatacgaataccgc
ccggatatccgggaccgcgctgcgctggagcgcaatttccgagagaagttcgagaccctc
aatcgcgttcgtcttaccgatagcgagttcgcgcgcctgctcgacgagatcgtcaccgcc
gatgtcttcaccgccgcgaagaccctgcgggagatcaatgcgtttacccgcgacgacggc
acgccgctaaactactcgctggtgaacctcaaggactggtgcaagaactccttcgaggtc
atcaaccagcttcgcatcaatacggacaacagccaccaccgatacgacgttctgctgctc
atcaacggggtgccctgcgtgcaggtcgaactcaagacgctcggcatcaacccgcgccgc
gcgatggagcagatcgtcgagtacaagaacgatcccggcaacggttacacgaagacgctg
ctgtgcttcctccagctcttcatcgtcagcaatcgtcaccgcacctggtacttcgccaac
aacaacacccgccacttcgcgttcaacgccgacgaacgtttcctgcccatctatgagttc
gccgacgaggcgaacacgaagatcacccacctcgacgacttcgccgcccgtttcctccag
aagtgcgcgctgggcaagaccctcagccgctatatggtgctcattcagagtgagcagaag
ctcatgatcatgcggccgtatcaggtctatgccgtgcagcagatcatgcagtgcatcgag
gacaacgccggcaacggtttcatctggcacaccaccggcagtggcaagacgctgacctca
ttcaaggcgtccacgctgctcaagcagaatgagcacattcacaagtgcctgttcgtggtg
gaccgcaaggacctcgatcgccagacgcgcgaggagttcaaccggttccaggaaggcagc
gtggaagaaaacaccaacaccgctgccctcgtgcgtcgtctgcgctcggaggactacgcc
gacaaggtgattgtcaccaccatccagaagctcggtctcgcgctggatgccgacagcaag
cgcaatcggcagcgcaagcggaacgatcagcccacgttcaaggagctcctggagccgctg
caggaccaacgcatcgtcttcattttcgacgaatgccaccgttcgcagttcggcgagaat
caccaggcgatcaaggagtttttccccagggcccagctctttggctttaccggcacgccg
atcttcgaagaaaacgccagcctgcagaagatcgaggacaccacggcctccatgcgcacc
acggaggacctgttccagaagcggctgcacgcctacaccatcacgaacgccatcgaggat
gggaacgtcctgcgcttccatgtggactacttcaagcccagggaagaggcaggaaagaag
gcgcccaggccaggcgaaggcatcgccaagcgcgcggtcatcgaggccatcctggccaag
catgacaccgccaccgccggacgccgcttcaatgccattctcgccacggcgtccatcaac
gatgccatcgagtactacggcctgttcaaggccatgcaggcggagcggcaggccgcagac
cccgagcggacgccgctcaacattgcctgcgtcttttcgccgcccgccgacggcgaccgg
gatgtgcagcagatccaggaagatctgccgcaggaaaagctcgacaacgagcaggacccc
gagggcaagaaggccgcgctgaaaggcattttggccgagtacaacgcgcggtatggcacg
aatcacgccattggtgaattcgatctgtactaccaggacgtgcagaagcgcatcaaggac
cagcagtggccgaatagcgacttctcgcacgcgcagaagatcgatatcaccatcgtggtg
gacatgctgctgaccggcttcgactccaagtatctcaacaccctgtacgtcgacaagaat
ctgaagcaccacggactcattcaagccttttcgcgcacgaatcgtgtgctgaacggcagc
aagccgtacggcaatattctcgactttcgccagcagcaggacgccgtggacgccgccatt
gcgctgttttccggcgaacagaccggcgagcaggcgcgggaaatctggctggtggacaag
gcgccggtggtcatccagaagctgcaggccgctgtgcagcagctggatagtttcatgagg
tcacagggcctcgagaccgcgcccgaggcagtaccgaacctcaagggcgacgccgcgcgg
gccgtgttcatcgagcgcttcaaggaagtgcagcgactcaagacgcagctcgaccagtac
accgacctcaccgacggcgacaaggttgccatcgagcaggtgctccccgatgcccagcat
cgcggtttcaagggtgcgtatctggagacggcgcagcgtctgcgcgagcagcagggcaag
acccggggcgatgacatggccgactccaaagccgccgaccagctcgatttcgagttcgtg
cttttcgcctcggcggtcatcgactacgactacatcatgggcctcattgcccggtacacg
gcgcaagggccaagcaagtcaaagatgacgcgcgatcagttgataggcctcatcagctcg
gatgccaagttcatggacgagcgtgaggacattgctgagtacatcggcacactcaaggcg
ggggaggcgttgaacgaaaccgccatccgcgagggttacacccgcttcaaggtggagaag
agcgtggcggaggttgccgctttggcagagaagcacgggctcaccgctgacgagctgcaa
aaatttgtcgacggtacgttggagcgaatgatttttgatgccgaacgacttggcgacttg
tttgccccgctggaccttggctggaaggcgcgcaaggacgccgaactcgacctgatgggg
gaactgtatccgctacttaccagacgtgcgcaggtgcgcgagatctcggggttgagtgcg
tatgagcagtaa

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