Gemmatimonas aurantiaca: GAU_0661
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Entry
GAU_0661 CDS
T00878
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase/AP lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GAU_0661 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_0661 (mutM)
Enzymes [BR:
gau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GAU_0661 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GAU_0661 (mutM)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GAU_0661 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DUF2537
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
BAH37703
NITE:
GAU_0661
UniProt:
C1A643
LinkDB
All DBs
Position
782407..783201
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AA seq
264 aa
AA seq
DB search
MPELPEVEYAASQLRDRVLGQTVQAVRVTHAAQARHLPSTDQQAIVGLTLDRVERRAKVQ
LLHFGSGVLEVHFRMTGDWVFSRVTDPVPPFERLALETDAGLRVSLVDPRALSVVRWHAA
GSYRGLEVGPEPLSDAFSVDVFRHALTRRRGPIKPVLLDQRVVAGIGNIYASEALWEAGI
APTAIANTITKPRLTRLRDAIRVVLETAPDARYFERDTPDEQERDRRWRVYGRDGRPCRR
CGSAIRRLVQAGRSTYYCAVCQRR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgaggtggaatatgcggcatctcaacttcgtgatcgggttctgggg
caaaccgtgcaggctgtacgggtcacccatgccgcacaggcgcgccaccttccgtccacc
gaccagcaggccatcgtcggcctgacgctcgaccgggtggagcgtcgggccaaggtccag
ctcctgcacttcggcagcggtgttctggaggtgcacttccggatgactggcgactgggtg
ttctcccgggtcaccgatccggtgccaccgttcgaacggttggccctcgaaaccgatgcg
gggctgcgcgtcagtctcgtcgacccgcgcgcgctcagtgtggtgcgctggcacgctgcc
ggttcctaccgcggtctcgaggtgggacccgagccgttgtccgacgcgttttccgtcgac
gtctttcggcacgcgctcacacgacggcgtggtcccatcaagccggtgttgctcgatcag
cgggtggttgccggcatcggcaacatctatgcgtcggaagcactctgggaagcggggatc
gctcccacggccatcgcgaacaccatcacgaagccccgactgacgcgtctgcgtgacgcc
atccgtgtcgtcctcgagacggcgcccgatgcacgctatttcgaacgcgatacacccgac
gagcaggaacgcgatcgacgttggcgcgtgtacggacgtgatggtcgaccgtgccgacgc
tgcgggtcagcgatccggcgcctcgtgcaagcgggtcgcagtacgtactactgtgcggtg
tgccagcggcgatag
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integrated database retrieval system
