Gemmatimonas aurantiaca: GAU_0667
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Entry
GAU_0667 CDS
T00878
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAU_0667 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gau03021
]
GAU_0667 (rho)
03019 Messenger RNA biogenesis [BR:
gau03019
]
GAU_0667 (rho)
Transcription machinery [BR:
gau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GAU_0667 (rho)
Messenger RNA biogenesis [BR:
gau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GAU_0667 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
Spore_III_AA
AAA_25
ATPase
Motif
Other DBs
NCBI-ProteinID:
BAH37709
UniProt:
C1A649
LinkDB
All DBs
Position
complement(788204..789457)
Genome browser
AA seq
417 aa
AA seq
DB search
MHVAELKRKSVPELLALAESLQISSVNGLRKQELIFRIEQALLDAETTLYGEGVLEVLPE
GYGFLRAQDFNYLHGPDDIYVSPSQVKRFDLRTGDTVMGEVRPPKEWERYLALLKVERIN
GGDPEQSKLRSAFDNLTAKYPDERIRLERKNGDLSTRVCDIIAPLGKGQRALIVAPPKGG
KTILLQQFANAIVENHPEVTLIILLIDERPEEVTDMQASCPQAEVICSTFDESADRHVQV
AEMVIEKSKRLVESGKDVVILLDSITRLARAHNAVAPQGGKLMSGGMEATAMQKPKAFFG
AARNLVEGGSLTIVATALVETNSRMDELIFEEFKGTGNMELVLDRKLAEKRIFPAIDINK
SGTRREELLLTPFEQQRVFLLRTFLADMPSDEALLFLLKRLERAENNQDFFEQMAEA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgtcgccgagctgaagcgaaagtccgttcctgaactgctggcgctcgccgagtcc
ctgcagatcagcagcgtcaatggccttcgcaagcaggaactcatcttccgcatcgaacag
gctctgctcgatgcggaaacgacgctctatggcgagggcgtcctcgaggtgctccccgaa
ggctacggcttccttcgggcccaggacttcaactacctgcacggccccgacgacatctac
gtctctccctctcaggtgaagcgcttcgatctccgcaccggcgatacggtgatgggcgaa
gtccgcccacccaaggagtgggaacgctatctcgcgctcctcaaggtggagcgcatcaac
ggtggtgaccccgagcagtccaaattgcgcagcgccttcgacaacctgaccgccaagtat
ccggacgagcgcattcgcctcgaacggaagaacggggacctctcgacccgtgtctgcgac
atcatcgccccactcggcaagggacaacgtgccctgatcgtcgcccctcccaagggtggc
aagacgatcctcctccagcagtttgccaacgcgatcgtcgagaatcatccggaggtcacg
ctcatcatcctgttgatcgatgagcgccctgaagaagtgaccgacatgcaggcgtcctgc
ccacaggccgaggtgatctgctccaccttcgacgaatcggccgatcgccacgtccaggtg
gcggagatggtcatcgagaagtcgaagcgactcgtggagtccggcaaggacgtagtcatc
ctgctcgattccatcacacgcctcgcccgcgcgcacaacgccgtggcgccgcagggcggc
aagctgatgtcgggcggcatggaagccaccgcgatgcagaagccgaaggcgttctttggt
gcggcacgcaatctggtcgagggtggctcactcaccattgtcgccaccgccctcgtcgag
accaactcgcgcatggacgagctgattttcgaggagttcaagggcaccggcaacatggag
ctcgtgctcgatcgcaaactcgccgaaaagcgcatcttccctgcgatcgatatcaacaag
tcgggcacccgacgcgaagagttgttgctcacaccgttcgagcagcagcgtgtcttcctg
ctgcgcacgttcctcgctgatatgcccagcgatgaagccctgctgttcctgctcaagcgc
ctcgagcgggccgagaacaaccaggatttcttcgaacagatggcggaggcatag
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