Gemmatimonas aurantiaca: GAU_0737
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Entry
GAU_0737 CDS
T00878
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03030
DNA replication
gau03430
Mismatch repair
gau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GAU_0737 (dnaE)
03430 Mismatch repair
GAU_0737 (dnaE)
03440 Homologous recombination
GAU_0737 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gau03032
]
GAU_0737 (dnaE)
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_0737 (dnaE)
Enzymes [BR:
gau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GAU_0737 (dnaE)
DNA replication proteins [BR:
gau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GAU_0737 (dnaE)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GAU_0737 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
PHP
DNA_pol3_finger
HHH_6
tRNA_anti-codon
PHP_C
Motif
Other DBs
NCBI-ProteinID:
BAH37779
UniProt:
C1A6B9
LinkDB
All DBs
Position
complement(870903..874400)
Genome browser
AA seq
1165 aa
AA seq
DB search
MSFVHLHCHSEYSLLDGANRIDDLIKRAQHFEMPALAITDHGNMHAAWEFQEKARKAGIK
PILGMEAYVAPGDRRQRGRPAPGVKPYYHLVLLARDIVGYRNLVKLTSLGYTEGFYTKPR
IDRELLAQYSEGLIVSSACLAGEVASHLMEDRVDQAREAAAWYAELFKGRYHLEVQAHTS
EGQAILNAKILSLADELSLPVVATNDAHFLKHEDHDAHDVLLCIGLGKDRNDRDRMKYDD
GLYFKAPDEIRTFFPGREDVLTNTLAIADAVDVQFAKKYYVPSFPLPEGVATENDMLVQI
ATDGAKERYGDPLPANVQERLDYELGVITKTGYAGYFLITADFIKAARDRGIPVGPGRGS
AAGSLVAYATRITDVCPLEFDLLFERFLNPERVSMPDVDVDFCFERRGEVIEYVRQKYGK
DSVGQIVTFGTMKSRAAIKDVGRTLGFTPAETDALAKLIPNAPNFSLTVKEAIEQVPEVK
AFYKNDERYRQLLDFAVKLEGLSRHTGVHAAGVVIAPGPLDEFVPICTQASKGAGGDGDE
RVIVTQYDMTALEKAGMLKMDFLGLTTLTVITDTLRNIKERLGKDVVLEERGFTDEKTYQ
VLRAGRTGGVFQFESPLATDVLKRMRCDRFDDLVASNALLRPGPLDAGMHNVYIRRKRGE
EPTVYALPELEPILSNTYGVITYQEQVMRIAQVLAGISLAEADVLRKAVGKKDAELIKKE
LGKFTEKAIARGYSKKIIEELAGQIETFGRYGFNKSHSVAYSVVAYHTAYLKTHYPAEFM
AALLSSNIGKTEEVIKYIAEAREMGIEVLAPDVNESGWRFTVIGDKRIRFGLGAIRNVGK
GAIDSLLAARTEGAFPTLHDLCGRVDLRLCNKRVFEALVAAGACDTLGGHRAQLLGALDH
AISEASLQQEEAERGQGSLFGDLMGDAPGNGGGNNAAPQMLPNIAMWSESERLQREKELL
GFYISGHPLEPHRTECELFATSTVAKLGTWTAEPVTIGVVVTAIRKQISKRTGAEFARLT
VEDFSGSSEVLVFPEAWGVIAERVRPDVPLLLKGGYSRKDQDVEGATFIVNEVTRFAELR
ASGDVAVAIDLGVSLDLSPAMMDDVRAKVESHEGSAPLEVRWLDGNGKVVRFRSKSLRVT
ASPAILSDLRALLGADRVRLVRTGG
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcgtccacctgcactgccactccgagtattcgctcctcgacggcgcgaatcgt
atcgatgatctgatcaaacgcgcgcagcacttcgagatgcctgcgctcgcgatcaccgat
cacggtaacatgcacgccgcctgggagttccaggaaaaggcgcgcaaggccggcatcaag
cccatcctcgggatggaagcctatgtcgcgccaggcgatcgccgccagcgcgggcgtccc
gcccccggggtcaagccgtactaccacctcgtgctgctggcccgcgacatcgtgggctac
cgcaatctcgtcaagctcacctccctcggatacaccgaaggcttctacacgaagccccgg
atcgaccgtgagctgctcgcccagtattccgaagggttgatcgtttcgtcggcctgcctg
gctggtgaagtcgcgtcacacctcatggaagaccgcgtcgatcaggcgcgggaggccgcg
gcgtggtatgcggagctcttcaaggggcgctatcacctcgaggtgcaggcgcacaccagc
gaaggacaggcgatcctcaatgcgaagatcctgtcgctcgctgacgagttgagcctgccg
gtggtggccacgaacgacgcgcacttcctcaagcacgaggatcacgacgcgcacgacgtg
ctgctgtgcatcggcctgggcaaggatcgcaacgaccgcgatcgcatgaagtacgacgat
ggattgtacttcaaggcccccgatgagatccgcacgtttttcccgggtcgtgaggacgtg
ctcacgaacacgctggccatcgccgatgcggtggacgtgcagttcgcgaagaagtactac
gtgccgtcgttcccgctgcccgaaggggtggcgaccgagaacgacatgctcgtgcagatc
gccacggacggtgcgaaggaacgttatggcgatccgctgccggccaatgtgcaggagcga
ctcgactacgagttgggcgtcatcacgaagaccgggtatgccggctacttcctgatcacg
gccgatttcatcaaggcggcgcgtgatcgtggcattccggttggcccgggccgcggttct
gcggcaggctcgctggtcgcctatgcgacccgcatcaccgacgtctgcccgctcgaattc
gacctgctgttcgaacgcttcctgaaccccgaacgcgtgtccatgcccgacgtggacgtg
gacttctgcttcgagcggcgcggggaagtgatcgagtacgtgcggcagaagtacggcaag
gacagcgttgggcagatcgtcacgttcggcaccatgaagtcgcgtgccgccatcaaggat
gtggggcgcaccttgggcttcacgccagcggaaacggacgcgctggccaagctgatcccg
aacgcaccaaacttctcgctcaccgtcaaggaagcgatcgagcaggtgccggaagtaaag
gcgttctacaagaacgacgaacgctaccggcagttgctcgacttcgcggtcaagctcgaa
ggtctctcacggcacaccggtgtgcacgccgccggcgtggtgatcgcgccgggtccgctc
gacgagttcgtccccatctgcacgcaggcctccaagggagccggcggcgatggtgacgag
cgggtgatcgtcacgcagtacgacatgacggcgctcgaaaaggccggcatgctcaagatg
gacttcctcggcctcaccacactcaccgtcatcaccgacacgctccgcaacatcaaggag
cgactcggcaaggacgtggtgctggaagagcgcggcttcaccgacgaaaaaacgtaccag
gtgttgcgtgccggccgtaccggcggcgtgttccagttcgaatcgccactggccacggac
gtgctcaagcgcatgcgctgcgaccgattcgacgacttggtcgcctcgaacgcgctgcta
cgtcccggcccgctcgatgccggcatgcacaacgtgtacatccggcgcaagcgcggcgaa
gagcccacggtgtacgcgctgcccgaactcgaacccatcctctccaacacctacggcgtc
atcacctatcaggaacaggtgatgcgtattgcccaggtgctggccggcatttcgctggcc
gaagccgacgtgctgcgaaaggccgtgggcaagaaggacgcggagctcatcaaaaaggag
ctcggcaagttcaccgagaaggcgatcgcgcgcggctacagcaagaagatcatcgaagag
ctcgcgggacagatcgaaacgttcgggcggtacggcttcaacaagagtcactcggtggcg
tactcggtggttgcctaccacaccgcgtacctcaagacacactacccggccgagttcatg
gcggcactgctgtcgtcgaacatcgggaagacggaagaagtgatcaagtacatcgccgaa
gcccgggaaatgggtatcgaggtgctggcgcccgatgtgaatgaatcgggctggcgcttc
acggtcatcggcgacaaacgcatccgcttcgggctcggcgccattcgcaacgtgggcaag
ggcgcgatcgattccctgctggcggcgcgcaccgaaggcgccttccccaccctgcatgac
ctgtgcgggcgtgtcgacctgcgcctgtgcaacaagcgtgtgttcgaagccctcgtggcc
gcgggtgcctgtgatacgctgggtggacaccgcgcccagctactgggggcgctcgaccac
gccatcagcgaagcgtccttgcagcaggaagaagcggaacggggacagggctcgctgttt
ggggacctcatgggcgacgcccccggcaatggcggagggaacaacgccgccccgcagatg
cttcccaacatcgccatgtggtcggaaagcgagcggctgcaacgggaaaaggagctgctc
ggcttctacatctcgggccatccgctcgagccacaccgaacagagtgcgaactctttgcc
accagcaccgtggcgaagctcggtacctggacggcagagccggtgaccatcggtgtggtg
gtgacggcaatccgtaaacagatctccaaacgcaccggagcggagttcgcccggttgaca
gtcgaggatttttccggatcttctgaggtgctggtgtttccggaagcgtggggggtgatt
gccgaacgtgtgcgccccgacgtgccactgctgctcaagggtggctactccaggaaggat
caggacgtcgaaggcgctactttcatcgtgaacgaggtcacgcgcttcgcggagctgcgg
gccagcggtgatgtggcggtggcaatcgatctgggcgtcagcctggatctatcgccggcg
atgatggatgatgtccgtgccaaggtggagtcccatgaagggtctgctccgctggaagtg
cggtggctggatggcaacggcaaggtggtccgtttccggtccaagtcactcagggtcacg
gcatcaccggcaattctctcggatcttcgcgcgctgcttggcgccgaccgtgtgcgcctc
gtgcgcaccggtggctga
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integrated database retrieval system
