Entry |
|
Symbol |
uvrA
|
Name |
(GenBank) UvrABC system protein A
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
gau Gemmatimonas aurantiaca
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:gau00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GAU_0828 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:gau03400]
GAU_0828 (uvrA)
DNA repair and recombination proteins [BR:gau03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAU_0828 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GAU_0828 (uvrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
988510..991398
|
AA seq |
962 aa
MKPSEALIVRGAREHNLRNISVTIPRDKLTVVTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLGLMEKPDVDAIEGLSPAISIEQKSAGHNPRSTVGTVTEIYDYLRLLYARGGT
PHCPNCGRAVQRQSPVQIAELILAWPEGTRIEIRAPLVQERKGEFRELFENARKQGFVRA
VVDGELIELADPPKLNRRLNHSISVVVDRLVVRPDDRGRITDSVETALRLAEGLAEVVRH
DDEEPTTEMFSERYGCPVCGISMPELEPRHFSFNSPFGACETCSGLGTTRSVSEDLILGD
ASISILEGVVLPWGEPDGYLRKVILPGLAKLLAFDLNAPWGKLSATVRQQLLYGMDDAPP
RARKGVKKAAKGAAAKTAAKSAAKATADSTWEGIVAHVQRRYDESSSDGVRLELEAFMVA
AACPSCLGRRLRPESLAVTIHGRNLGEVVEQSVVDALAFFDDVPVRSAGHPGLDPGIAGP
ILKEVRERLRFLVDVGLDYLTLNRSAESLSGGEAQRIRLATQIGSRLVGVLYILDEPSIG
LHQRDNGRLLTTLKQLRDLGNTVIVVEHDEETIRDADYLIDLGPGAGKHGGEVIAAGSVQ
DIMTNPASITGAYLTGARKVDVPTKRRPRDPARTLTVHGAREHNLKDVTAEFPLGMFVAV
TGVSGSGKSTLVTDILQKALSRHFYRARVIPGAHTRITGLEHLDKIIDIDQSPIGRTPRS
NPATYTGVFTPVRELFAELPEAKIRGYGPGRFSFNVKGGRCEACQGDGLVKIEMHFLPDV
FVPCDVCKGKRFNRETLEVRFRGLSISEILDLTVEDACGVFEHQPRIVQKLETLRDVGLG
YIHLGQSATTLSGGEAQRVKLATELSKRDTGRTLYILDEPTTGLHFEDVRVLLGVMHKLV
DRGNTILVIEHNLDVIKTADWIVDLGPEGGVRGGTIVAQGTPEVVAKVRESHTGHYLRPL
LR |
NT seq |
2889 nt +upstreamnt +downstreamnt
gtgaagccctctgaagcgctcatcgtgcgtggtgcgcgtgagcacaatttgcgcaacatc
agcgtgacgatcccacgcgacaagctcacggtcgtgaccgggctgtcgggatcgggcaag
tcgtcgctggcttttgacacgatctacgccgaagggcagcgacggtatgtcgagtcgctc
tcggcctatgcgcggcagttcctcgggttgatggaaaagcccgatgtcgacgccatcgaa
ggattgtcgccggccatctccatcgagcagaagtcggcgggacacaatccccggtcgacg
gtggggacggtcacggagatctacgactatctccgtctgctgtatgcgcgtggtggcaca
ccacattgcccgaattgcgggcgcgccgtacagcgtcagagtccggtgcagatcgccgag
ctgattcttgcttggcccgaaggcacccgcatcgagattcgtgcgccgctggtgcaggaa
cggaagggggagttccgcgagctcttcgagaatgcccgcaagcaggggttcgtgcgcgca
gtggtcgacggcgagttgatcgaactggccgatccgccaaagctcaaccggcgtctcaat
cactccatctcggtggtggtcgatcgtctggtggttcggcccgatgatcgtgggcgcatc
accgactccgtcgagacggcactgcgtctggccgaagggctggccgaagtcgtgcgccat
gacgacgaggagccaaccacggagatgttctcggagcgctacggctgcccggtgtgtggc
atctccatgcccgaactcgagccgcggcatttttcgttcaactctccgttcggggcctgt
gaaacgtgcagtggtctgggcacgacccgcagcgtgagcgaagatctcatcctcggcgat
gcctcgatctcgattctcgagggtgtggtgctcccctggggcgagcccgatgggtatctg
cgcaaggtgatcctgcccggcctggccaagctgctcgcattcgatctcaacgcaccgtgg
ggcaagttgtcggccacggtacgccaacagttgctgtatggcatggatgacgccccgccg
cgtgcgcgaaagggtgtgaagaaggcggccaagggcgctgcggcaaagaccgctgccaag
tcggctgcaaaagcaacggcggacagcacctgggaaggcatcgtggcgcacgtgcagcgc
cgctatgacgaaagcagttccgatggcgtgcgcctcgagctcgaagcgttcatggtggcc
gcagcgtgcccgtcatgtctgggacgccgtctgcgtcccgaatcgctggctgtcaccatc
cacggccgcaatctgggtgaagtcgtggaacagagcgtggtggatgccctcgcgttcttc
gatgatgtgcctgtgcgcagtgccggacatccggggctcgatccgggcatcgctggcccg
attctcaaggaagtgcgcgaacgtctgcgctttctcgtggatgtggggctcgactatctc
acgctcaaccgcagcgccgagtcgctgtcgggtggtgaggcacagcgtattcggctggcc
acacagattggctcacgtctggtcggcgtgttgtacatcctcgatgagcccagcatcggg
ctgcatcagcgtgacaacggacggttgctcaccacgctcaagcagcttcgcgatctcggc
aacaccgtgatcgtggtggagcatgatgaagaaaccatccgcgacgccgactacctgatc
gatctcggaccgggcgccgggaaacacggtggggaagtgatcgcggccggttcggtgcag
gacatcatgacgaatccggcatcgatcacgggcgcctatctcacgggtgcgcgcaaggtg
gacgtacccacgaagcgtcgtccgcgtgatccggcgcgcacgctgacggtgcacggggcg
cgcgagcacaatctcaaggatgtcaccgcggagttcccgctcggcatgttcgtggccgtg
acgggagtgtcgggttctggcaagtcgaccctggtcaccgacatcctgcagaaagccctg
tcgcggcacttctatcgggcgcgtgtgattcccggggcgcatacgcgcatcaccggactc
gagcacctcgacaagatcatcgacatcgaccagagccccatcggtcgcacgccacgctcc
aacccggccacgtacaccggggtgttcacgccggtgcgtgaactgtttgccgagttgccg
gaagccaagatccgcggctacggaccgggacgcttctcgttcaacgtgaagggcggccgg
tgtgaagcgtgtcagggcgacggtctggtgaagatcgagatgcatttcctgcccgatgtc
ttcgtgccgtgtgatgtctgcaaaggcaagcgcttcaaccgcgagacactcgaggtgcgg
ttccgcggcctcagcatctccgaaattctcgatctcaccgtcgaagacgcctgtggcgtg
ttcgaacatcagccacgcatcgtgcagaagctcgaaacactgcgtgacgtggggctgggg
tacatccatctcgggcagagcgcgaccacgctgtccggtggtgaagcgcagcgcgtgaag
ctggccaccgaattgtccaagcgggacacgggacgcacgctgtacatcctcgacgagccc
accaccggtctgcatttcgaagacgtgcgggtgttgctcggtgtcatgcacaagctcgtc
gatcgtggcaacaccattctggtgatcgagcacaatctcgatgtcatcaagaccgccgac
tggatcgtcgatctcgggccggaaggcggcgtgcggggtggcaccatcgtggcccagggc
acgccggaagtggtggccaaggtgcgtgaaagccacacggggcactacctgcgaccattg
ctgcgttga |