Gemmatimonas aurantiaca: GAU_1170
Help
Entry
GAU_1170 CDS
T00878
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GAU_1170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gau03021
]
GAU_1170
Transcription machinery [BR:
gau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GAU_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
HTH_Crp_2
KORA
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
BAH38212
UniProt:
C1A7K2
LinkDB
All DBs
Position
1394592..1395452
Genome browser
AA seq
286 aa
AA seq
DB search
MAVTPPKKKASYDEGSLDQYLRDISAYPLISREEEAELARRIRQGDQEALDKLVRSNLRF
VVSVAKKYQNQGVSLSDLINEGNLGLIRAARKFDETKGIKFISYAVWWIRQAILQALAEQ
SRIVRVPLNRAGTLHRIGKRANALLQELGREATHAEIAHGMDITEEEVAKTMSISQVHLS
LDAPLTPGEDNRLLDYLPDTVHPTPEDQTFDKALTEAIEESLGGLKEREAKILRLYFGID
GADPMTLEEIGSQLGITRERVRQIKEKALSRLRHVSRSKSLESFLG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcacccccccgaagaagaaggcgtcgtacgatgaagggtccctcgatcagtat
ttgcgcgacatcagcgcctatccgctgatctcgagggaagaagaagcggaactcgcacga
cgcattcgtcagggggatcaggaggcgctcgacaagttggtgcgctccaatctgcgcttc
gtcgtttccgtcgcgaagaaataccagaatcagggcgtgtcgctgtccgacctgatcaat
gagggcaacctcggcctcattcgcgcggcccggaagttcgacgaaacgaagggcatcaag
ttcatctcgtatgccgtgtggtggatccgtcaggccatcctgcaggcgctcgctgagcag
tcgcgtatcgtacgcgtgccgctcaaccgggccggcaccttgcaccggatcggcaagcgc
gcgaatgcgctgctgcaggaactcggtcgcgaagccacacacgccgagatcgcccacggg
atggacatcacggaggaggaggtggccaagaccatgtccatctcccaggtgcacctgtcg
ctcgatgcgccgctcacacccggcgaagacaaccggctgctggattatttgccggacacg
gtgcaccccacccccgaagaccagaccttcgacaaggcgctcaccgaggccatcgaagag
tcgctgggcggactcaaggagcgcgaggcgaaaatcctccgactctacttcggcatcgac
ggggccgacccgatgacgctcgaagaaatcggctcgcagctcggcatcacccgcgagcgt
gtgcgacagatcaaggaaaaggcgctctcgcgcctgcggcatgtctctcgttccaagtca
ctcgaaagttttctcggataa
DBGET
integrated database retrieval system
