Gemmatimonas aurantiaca: GAU_1536
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Entry
GAU_1536 CDS
T00878
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAU_1536 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gau03019
]
GAU_1536 (groEL)
03110 Chaperones and folding catalysts [BR:
gau03110
]
GAU_1536 (groEL)
03029 Mitochondrial biogenesis [BR:
gau03029
]
GAU_1536 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gau04147
]
GAU_1536 (groEL)
Enzymes [BR:
gau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GAU_1536 (groEL)
Messenger RNA biogenesis [BR:
gau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GAU_1536 (groEL)
Chaperones and folding catalysts [BR:
gau03110
]
Heat shock proteins
HSP60 / Chaperonin
GAU_1536 (groEL)
Mitochondrial biogenesis [BR:
gau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GAU_1536 (groEL)
Exosome [BR:
gau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GAU_1536 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
GAU_1536 (groEL)
Exosomal proteins of breast cancer cells
GAU_1536 (groEL)
Exosomal proteins of colorectal cancer cells
GAU_1536 (groEL)
Exosomal proteins of bladder cancer cells
GAU_1536 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BAH38578
UniProt:
C1A8L8
LinkDB
All DBs
Position
1844220..1845851
Genome browser
AA seq
543 aa
AA seq
DB search
MAAKELHFNVDARAALKRGVDQLAEAVKVTLGPKGRNVVIDKKFGAPTVTKDGVTVAKEI
ELADPIENMGAQMVKEVATKTSDLAGDGTTTATVLAQAIFREGLKNVTAGSNPMALKRGI
EKAVAGIVEELKRISVPTTGKKEIAQVGTISANNDPEIGNLIAEAMEKVGKDGVITVEEA
KGLETTLETVDGMQFDRGYLSPYFVTDPEKMEAVLENALILIHDKKISAMKDLLPALEKV
AQLGKPLLIIAEDVEGEALATLVVNKLRGTLRICAVKAPGFGDRRKAMLQDIATLTKGQV
ISDEVGFKLENAVLTDLGSAKRIVIDKDNTTIIDGAGEQKDIEGRVREIRGAIDKSTSDY
DREKLQERLAKLAGGVAVINVGAATEAEMKEKKARVEDALHATRAAVEEGIVPGGGVALI
RAQHVLKDVKVAERDEQIGVDIVRRAIEEPLRMIVQNAGGEGSIVVEKIRTAKETSFGYN
ALTDVYEDLVQAGVIDPTKVTRTALQNAASIAGLLLTTEALIVEKKEDKPAAPAGGPGMG
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagaactgcatttcaacgttgacgcacgcgcggcactgaagcgcggcgtc
gatcagctcgccgaagcggtgaaggtcacgctcggccccaagggacgcaacgtcgtcatc
gacaagaagttcggcgcgcccacggtgaccaaggacggcgtgaccgtcgccaaggaaatc
gagctcgccgatccgatcgagaacatgggcgcgcagatggtgaaggaagtcgcgaccaag
acgtcggatcttgctggcgacggcaccaccacggccaccgtgctggcgcaggcgatcttc
cgtgaaggcctcaagaacgtcaccgccggctccaacccgatggcgctcaagcgcggcatc
gagaaggccgttgccggtatcgtcgaagagctgaagcgcatctccgtgcccaccacgggc
aagaaggaaatcgcgcaggttggcaccatctcggcgaacaacgatcccgagatcggcaac
ctcatcgcggaagcgatggaaaaggtcggcaaggacggcgtcatcaccgtcgaagaggcc
aagggccttgagacgacgctggagacggtcgatggtatgcagttcgaccgtggctacctc
tcgccgtacttcgtcacggatccggaaaagatggaagccgttctcgagaacgcgctcatc
ctgatccacgacaagaagatctcggccatgaaggatctgctgccggcactcgaaaaggtc
gcgcagctcggcaagcccctgctcatcatcgcggaagacgtcgaaggcgaagcgctggcc
acgctggtcgtgaacaagctccgcggcacgctgcgcatctgcgccgtgaaggccccgggc
ttcggtgatcgccgcaaggccatgctgcaggacatcgcgacgttgaccaaggggcaggtc
atctccgacgaagtcggcttcaagctcgaaaacgcggtcctcaccgacctcggctcggcc
aagcgcatcgtgatcgacaaggacaacacgaccatcatcgacggcgctggtgaacagaag
gacatcgaaggccgcgtgcgtgaaatccgtggtgcgatcgacaagagcacgtcggactac
gatcgtgagaagctccaggagcgcctcgcgaagctcgccggtggtgtggccgtcatcaat
gtcggcgccgcgaccgaagccgaaatgaaggaaaagaaggcccgcgtcgaagacgcgctg
cacgccacgcgtgccgccgtcgaggaaggcatcgtccccggtggcggtgtggccctcatt
cgcgcgcagcacgtgctgaaggacgtgaaggtcgccgagcgcgacgagcagatcggtgtc
gacatcgtgcgtcgcgcgatcgaagagccgctccgcatgatcgtgcagaatgcggggggc
gaaggctccatcgtcgtcgagaagatccgcacggcgaaggaaaccagcttcggctacaac
gcgctgaccgacgtgtacgaagatctcgtgcaggccggcgtcatcgacccgaccaaggtc
acgcgcacggcgctgcagaacgcggcctcgatcgcgggtctcctgctgacgaccgaagca
ctgatcgtcgagaagaaggaagacaagccggccgctccggccggtggcccgggcatgggc
ggcatgtactaa
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integrated database retrieval system
