Gemmatimonas aurantiaca: GAU_1545
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Entry
GAU_1545 CDS
T00878
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03420
Nucleotide excision repair
gau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GAU_1545
03430 Mismatch repair
GAU_1545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_1545
Enzymes [BR:
gau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GAU_1545
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GAU_1545
MMR (mismatch excision repair)
Other MMR factors
GAU_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAH38587
UniProt:
C1A8M7
LinkDB
All DBs
Position
1853228..1855690
Genome browser
AA seq
820 aa
AA seq
DB search
MTTTGWAGSLFDAVPQKPALDLDAITRGLNPGQTEAVFHDDGPALVLAGAGSGKTRVLTT
RIARLIGTMNVAPHEILAVTFTNKAAGEMRARIAKFLGHEPKGMWCGTFHALGARMLRGV
APLVGREQNFTIYDEDDAIGAVKRVMERRNLSPKEFAPKAILSAISSAKNALISPSEFAR
NARDTFATAVAGVYTDLEVALQQANAVTFDDLLVLPVRALETDEALRAHYQRRFRYLLVD
EYQDTNAAQYRFVQLMGGGYRNVMVVGDDDQSIYGWRGADIRNILDFERDFPGARIVRLE
ENYRSTPNVLALANAVIAENTERRGKTLRATRPAGEAVTLIEALDERDEADFIAETILTR
MSRSDLARRDCAILYRTNAQSRAIEDAFRRRNIPYRLIGAVRFYDRREIRDLMAYLKLVA
NPADDEAFRRAVNVPKRGLGDATIALLAEQAIAEGKPMLEMATRFDVLSGMRPAARAALE
DFGNLVQRLRTMAVDAAVDELLRELVQVIKYADHLRAEGPEGLERIENVREMIAGAAEVV
ADEGGEVGLTPLDHFLQSSTLVAGVDKLDPNADAVTCMTMHNAKGLEFPLVFVCGLEDGL
FPLARAAEDPAQLEEERRLFYVGITRAEEKLYLTCAEQRRRNGELMYSMPSRFLEVIKPS
LAERGKTARAKSEGRSGFGGYGSGYGSRRGNDDGWGRSGNSAGAGTGGAKRSVGPYGSAG
YRPSGSGVGANSGDIPFGKAPGGFSTPARRERAPEPEDESQDAPMFRPGERVKHAKFGTG
TIAELSGSGRDTKVRIDFDDEEIGRKTLVLAQAKLERGWE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacgggttgggcgggttcgctgttcgatgcagttcctcaaaagccggcactg
gatctcgatgccattacgcgcgggctcaatccggggcaaactgaggcggttttccacgac
gatggtccggcacttgtgctcgccggcgcggggtcaggcaagacacgcgtcctgaccacg
cgcattgcccggctgatcgggaccatgaatgtggccccgcacgaaatcctcgcggtgacc
ttcaccaacaaggccgccggggagatgcgcgcccgcatcgcgaagttcctcgggcatgag
ccgaagggcatgtggtgcggcaccttccatgcgctcggcgcgcgtatgctgcgtggagtg
gcgccattggtcggacgcgaacagaacttcaccatctacgacgaagacgacgccatcggt
gccgtcaagcgcgtgatggaacggcgcaatctgagccccaaggagtttgcgccgaaggcc
atcctcagtgcgatctccagcgccaagaacgcgctgatctcgccgtcggagttcgcccgg
aatgcacgggacacgtttgccaccgccgtggccggtgtgtacaccgacctggaagttgcg
ctgcagcaggcgaatgccgtcacgttcgatgatctgctggtgttgccggtacgcgcgctc
gaaaccgatgaagcgctgcgcgcgcactaccagcggcgttttcggtatctgctggtcgat
gagtatcaggacaccaatgcggcccagtaccggttcgtgcagctcatgggcgggggctat
cgcaacgtgatggtggtcggtgacgacgatcagtccatctacggctggcgtggtgccgat
atccgcaacatcctggatttcgagcgcgactttcccggtgcgcggatcgtgcgtctcgaa
gagaactatcgctctacccccaatgtgctggcgctggcgaatgccgtgatcgccgagaac
accgagcggcgaggcaagaccctgcgcgccacgcggccagccggcgaagcggtgacgctc
atcgaggcactcgatgaacgtgacgaggcggacttcatcgccgaaacgattctcacgcgc
atgtcgcgctccgatctcgcgcgtcgtgattgtgcgatcctgtatcgtaccaacgcccag
tcgcgggccatcgaagacgcgtttcggcgacgcaatattccctatcggctcattggcgcc
gtgcgcttctacgatcgccgggaaatccgcgatctgatggcgtacctcaagctcgtcgcc
aatccggcggatgatgaggctttccgccgtgccgtgaatgtgccgaagcgcggcctgggt
gatgccacgattgccttgctggcggagcaggcgatcgccgaaggcaagccgatgctggag
atggccacgcgattcgacgtgttgagtggcatgcggcccgcagcacgagcggccctcgaa
gattttgggaacctggtccagcggttgcgaaccatggccgtggatgcggcggtggacgag
ttgctgcgtgagctggtgcaggtgatcaagtatgccgaccatctgcgtgctgaaggcccc
gaaggcctggagcgcatcgagaacgtgcgcgaaatgatcgccggtgccgcggaagtggtg
gccgatgaaggcggtgaagtgggtctcacaccgcttgatcactttctgcaatcgtccacg
ctggtggctggtgtcgacaagctcgatcccaacgccgatgccgtgacgtgcatgactatg
cacaacgccaagggactggaattcccgctcgtatttgtgtgcggactcgaggacggcctc
ttcccattggcgcgtgccgccgaagatccggcgcaactcgaagaagagcgtcggctcttt
tacgtgggcatcacgcgcgccgaagagaagctctatctcacctgcgcggagcagcggcgc
cggaatggagagctgatgtactccatgccgtcacgttttctcgaagtcatcaagccctcg
ctggccgaacggggcaagacggcgcgcgcgaagtccgaaggacggagtggcttcggtggc
tacggcagcggttacggcagtcgtcgcggcaacgacgacggatggggacgcagtggcaac
agtgctggtgctggaacaggcggcgccaagcggtcggtggggccgtatggctcggcgggc
tatcgtccctccggcagtggcgtgggcgccaacagtggcgatatcccgttcggcaaggcg
cccggtggcttcagcacgccggctcgtcgcgagcgggcgcccgaaccagaggacgaatcg
caggacgcgcccatgttccgtcccggtgaacgggtgaaacatgccaagttcggcaccggc
acgatcgccgaactgtccggcagcggtcgcgataccaaagtgcgtatcgatttcgacgat
gaggagatcgggcgcaagacgctcgttctcgcacaggccaagctcgaacgagggtgggag
tga
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