Gemmatimonas aurantiaca: GAU_1558
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Entry
GAU_1558 CDS
T00878
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gau
Gemmatimonas aurantiaca
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gau03016
]
GAU_1558 (truB)
Enzymes [BR:
gau01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GAU_1558 (truB)
Transfer RNA biogenesis [BR:
gau03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GAU_1558 (truB)
Prokaryotic type
GAU_1558 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
BAH38600
UniProt:
C1A8P0
LinkDB
All DBs
Position
1868462..1869394
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AA seq
310 aa
AA seq
DB search
MHTGAHAVIGAPAHSGVLYVDKPAGRSSHDMVGVVRRAARTRRVGHAGTLDPFATGLLVI
AVGTATRLLPYIVGEPKVYDATIQFGADTNTDDGTGIVVREAPVPDAAVLADPVHAVRLA
AEAILTGHITQIPPQYSAKHVDGVRAYDLARRGEVVDLAPVPVHVRGWEWRGASESTLDV
RITCGGGTYIRALARDLGRALGSAAHCSVLRRVQSGPASVDHAVSFDALAPGSVIDGEVP
LRSPLELLGDMATQILDEEGLVALRFGRTLEATVPGAQVALLHEGAIAALGVRTAGDRWQ
PRVVLIGANG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcataccggagcgcatgccgtgatcggcgctccggctcactcgggcgtgctctacgtc
gacaagccggcgggccgctcttcgcatgacatggtcggcgtcgtgcgtcgtgcggcgcgc
acgcgtcgggtgggacatgccggcacgctcgatccgttcgccacgggattgctcgtcatc
gcagtgggcacggccacgcgcctgcttccctacatcgtcggggagcccaaagtgtacgac
gccaccattcagtttggcgccgacacgaacaccgatgatggcacgggcatcgttgtccgc
gaagccccggtgcccgatgccgccgtgctcgccgatccggtacacgccgtgcgccttgcc
gccgaggcgatactgaccggacacatcacgcagatccccccgcagtattcggccaaacat
gtcgatggcgtgcgggcctatgatctcgcgcggcgcggagaggtcgtcgatctcgcgccg
gtgccggtgcatgtccgcgggtgggaatggcgtggggccagcgagagcacgctcgatgtg
cggatcacctgtggcggtggcacctacatccgcgccctcgcccgcgatctcggccgcgcc
ctgggcagtgcagcgcattgctcggtgttgcgtcgtgtgcagagcggcccggcctcggtg
gatcatgccgtgtctttcgacgccctcgcgccgggcagcgtgatcgacggcgaagtgccg
ttgcgttcgcccctcgagttgttgggtgacatggccacccagatcctcgacgaggagggg
ctcgtggcgctgcgttttggccggacgctcgaggccaccgtgcccggtgcccaggtcgcg
ttgcttcacgagggcgcgatcgcggcactcggtgtgcgcacagcgggcgatcgttggcag
ccgcgcgtggtgttgatcggagccaacgggtga
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