Gemmatimonas aurantiaca: GAU_1588
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Entry
GAU_1588 CDS
T00878
Symbol
lpxC_fabZ
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau00061
Fatty acid biosynthesis
gau00540
Lipopolysaccharide biosynthesis
gau01100
Metabolic pathways
gau01212
Fatty acid metabolism
Module
gau_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GAU_1588 (lpxC_fabZ)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GAU_1588 (lpxC_fabZ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gau01005
]
GAU_1588 (lpxC_fabZ)
01004 Lipid biosynthesis proteins [BR:
gau01004
]
GAU_1588 (lpxC_fabZ)
Enzymes [BR:
gau01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
GAU_1588 (lpxC_fabZ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
GAU_1588 (lpxC_fabZ)
Lipopolysaccharide biosynthesis proteins [BR:
gau01005
]
Lipid A
GAU_1588 (lpxC_fabZ)
Lipid biosynthesis proteins [BR:
gau01004
]
Fatty acid synthase
Component type
GAU_1588 (lpxC_fabZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
4HBT
MaoC_dehydratas
ApeI-like
4HBT_2
MC_hydratase
FlK
Motif
Other DBs
NCBI-ProteinID:
BAH38630
UniProt:
C1A8S0
LinkDB
All DBs
Position
1905811..1907085
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AA seq
424 aa
AA seq
DB search
MGGERRTIAGVASVQGIGLHLGQPCTLTFRPAPACHGIVFRRMDLPGTPTIPARIDVAVQ
AERRTQLGTGEAALHTVEHVLAAVGGLAIDDLLIDMDGPEPPIMDGSAKAFLDALTEAGV
VTHPGRVDWLVLRKSIRVVDGESVYEAHPALDYSLDVDIDFPHPLIGHQAGHYRVTAEGF
RRDLADARTFGFLHEVDALRAKGLIQGASTANAVVLDAAGVVDTTLRWPDEFVRHKALDC
VGDLVLAGARVRARIIAHKPSHRGTVALVRALVQHAVREPAVYTIEDILQVLPHRYPFLL
VDRILELEEGKRIVGLKNVTINEPFFQGHFPGHPIMPGVLIIEAMAQVGGMLLMRTVTDP
STKVVYFMSLDNVKFRRPVKPGDQLRFEMEVLQMRGTMCKMRGVAYVDGQVVTEAEMAAM
VRDR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggcggtgagcggcgcacgattgccggtgtggcctcggtgcaggggatcgggctgcac
ctggggcaaccgtgcacgttgacctttcgtccggcaccggcttgtcacgggattgtgttt
cgccgcatggatctgccgggaacgccgaccattccggcacgtatcgacgtggcggtgcag
gccgagcgacgcacccagttgggcaccggtgaggccgcgctgcacaccgtcgaacatgtc
ctggcggccgttggcggattggcgatcgatgatttgctcatcgacatggacggccctgag
ccgcccatcatggatgggagcgcgaaggcctttctcgatgcgctcacggaggccggggtg
gtcacacatcccgggcgcgtggattggttggttctgcggaagtccattcgtgtggtggac
ggcgaatcggtgtacgaagcgcatccggcgctcgactattcgctggacgtggatatcgac
tttccgcaccccctcatcgggcatcaggcgggccactaccgggtcaccgccgaagggttt
cggcgtgaccttgccgatgcacgcaccttcgggttcctgcatgaggtggacgcgcttcgc
gcgaagggattgattcagggggcatcgaccgcgaacgcagtcgtgctcgacgccgcgggg
gtcgtggacacgacactccgctggccagacgaattcgttcggcacaaggcgctcgattgt
gtgggcgacctggtgctggccggtgcacgcgttcgcgcgcgcatcattgctcacaagccg
agtcatcggggcacagtcgccctggttcgtgcgctcgtgcaacacgcagtccgggagccc
gccgtgtacaccatcgaagacatcctgcaggtcctgccgcatcgttatccgttcctgctc
gtcgatcgcatcctcgaactcgaggaaggcaagcgcatcgtggggctcaagaacgtgacg
atcaacgagccgttctttcagggacacttccctgggcatccgatcatgccgggggtgctc
atcatcgaagcgatggcccaggtgggtggcatgctgctgatgcgcacggtgaccgacccg
agcacgaaggtcgtgtacttcatgtcgctcgacaatgtgaagttccgtcgtccggtgaag
ccgggagatcagttgcgtttcgagatggaagtgctgcagatgcgtggcacgatgtgcaag
atgcgtggtgtcgcctacgtggacggacaggtggtgaccgaagccgaaatggcggcgatg
gttcgcgatcgatga
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