KEGG   Gemmatimonas aurantiaca: GAU_1871
Entry
GAU_1871          CDS       T00878                                 
Name
(GenBank) hypothetical protein
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
gau  Gemmatimonas aurantiaca
Pathway
gau03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gau00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GAU_1871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gau03019]
    GAU_1871
Messenger RNA biogenesis [BR:gau03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GAU_1871
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B ATP-synt_B KH_2
Other DBs
NCBI-ProteinID: BAH38913
UniProt: C1A488
LinkDB
Position
complement(2189741..2191327)
AA seq 528 aa
MGELSLAALTGALGMVAAVIAFVFGRRSGRQAEIGEQQRAKATAEDTAGRILDEARREAD
TLRKGAIVSGKEEVLQLRETHEQEFRQRRVDVEREEKRILERESQVDRVREGLEGRELEV
QRRGKELTQREDAATARSLELDTLFADERRRLEQIAGLSADQAKAELVRRLEDEALADAA
SRLREIRESAKRNADREARKIVALAVQRVAAETTAETTVSAVALPNDEMKGRIIGREGRN
IRAFELATGVDVIIDDTPDTVVVSCFDPVRRETARLALEKLVSDGRIHPGRIEEVVAKAR
REVEVAIVETGEQAAYEVGITGLHPELIKLIGRMKWRTSYGQNILAHSKEVAWLAGMMAA
ELGLDVALAKRGALLHDIGKVLTHEHEGTHVQLGVEMATKYGENPLVVNCIAAHHDDVPH
ESEVSVLVQAADGISGSRPGARREAFETYVKRLEGLERIASSYRGVERVFAIQAGREVRV
VVTPEQVDDLRMAALSEEIARRIESELQYPGQIKVVVIRESRAVDFAR
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgggagaactttccctggccgcgctgactggcgcgctgggtatggtcgcggccgtgatc
gcctttgtgtttgggcgtcgctcgggccgccaggccgagatcggcgaacagcagcgtgcc
aaggcgaccgctgaagacacggccggacgcatcctcgacgaggcgcgtcgtgaagccgac
acccttcgcaagggtgccatcgtctccggcaaggaagaggtgctgcagctccgggagacg
cacgagcaggagttccgtcagcgtcgggtcgacgtggagcgcgaagaaaagcgcattctg
gagcgcgaatcgcaggtggatcgggtgcgtgaaggcctcgagggacgggagctcgaggtg
cagcggcgcggcaaggagctgacccagcgggaggacgccgccacggcgcgttcactggaa
ctcgacaccctctttgccgacgaacgtcgccgtctcgaacagatcgccgggctgagtgcc
gatcaggccaaggccgaactggttcggcgcctcgaagacgaagcgctggccgatgccgcc
agccggttgcgagagattcgggaatcggccaagcgcaatgcagaccgtgaagcccggaaa
atcgtggcgctcgccgtgcagcgtgtcgccgccgaaaccaccgccgaaacgacagtgtcg
gccgtggcgctgccgaacgatgagatgaagggccgtatcatcggccgagaggggcgcaac
attcgcgccttcgaactggccaccggtgtcgatgtcatcatcgacgatacgccggatacg
gtggtggtgtcctgcttcgatccggtgcgtcgtgagacggcgcgcctggcactcgaaaag
ctggtgagcgatggtcgcatccatccgggacgcatcgaagaagtggtggccaaggcccgc
cgtgaggtggaggtggccatcgtggagaccggtgaacaggccgcgtacgaagtcggcatc
accggtctgcatcccgagctgatcaagctcatcggccgcatgaagtggcgcaccagctac
gggcagaatatcctcgcgcacagcaaggaagtggcctggctggccggcatgatggccgcc
gagctggggctcgacgtggcgctcgccaagcgtggtgcgctgttgcacgacatcggcaag
gtgctcacgcacgaacacgagggcacccacgtgcagcttggcgtggagatggccaccaag
tacggcgaaaacccgctggtggtgaactgcatcgccgcccatcatgacgatgtaccacac
gagagcgaagtctcggtgctcgtacaggccgccgacggcatttcgggttcacgtcccggt
gcgcgccgcgaagcattcgaaacctacgtgaagcgtctcgaaggcctcgaacgcattgcg
tcgagctatcgcggcgtggaacgcgtgtttgccattcaggcgggccgcgaagtgcgcgtt
gtggtcacccccgagcaggtcgacgacctgcgcatggcggcgctctcggaagagattgcg
cgccgtatcgaatccgagttgcagtatcccggccagatcaaggtcgtggtcatccgagaa
agccgagcggtggactttgcgcgctga

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