Gemmatimonas aurantiaca: GAU_1871
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Entry
GAU_1871 CDS
T00878
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAU_1871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gau03019
]
GAU_1871
Messenger RNA biogenesis [BR:
gau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GAU_1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
ATP-synt_B
KH_2
Motif
Other DBs
NCBI-ProteinID:
BAH38913
UniProt:
C1A488
LinkDB
All DBs
Position
complement(2189741..2191327)
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AA seq
528 aa
AA seq
DB search
MGELSLAALTGALGMVAAVIAFVFGRRSGRQAEIGEQQRAKATAEDTAGRILDEARREAD
TLRKGAIVSGKEEVLQLRETHEQEFRQRRVDVEREEKRILERESQVDRVREGLEGRELEV
QRRGKELTQREDAATARSLELDTLFADERRRLEQIAGLSADQAKAELVRRLEDEALADAA
SRLREIRESAKRNADREARKIVALAVQRVAAETTAETTVSAVALPNDEMKGRIIGREGRN
IRAFELATGVDVIIDDTPDTVVVSCFDPVRRETARLALEKLVSDGRIHPGRIEEVVAKAR
REVEVAIVETGEQAAYEVGITGLHPELIKLIGRMKWRTSYGQNILAHSKEVAWLAGMMAA
ELGLDVALAKRGALLHDIGKVLTHEHEGTHVQLGVEMATKYGENPLVVNCIAAHHDDVPH
ESEVSVLVQAADGISGSRPGARREAFETYVKRLEGLERIASSYRGVERVFAIQAGREVRV
VVTPEQVDDLRMAALSEEIARRIESELQYPGQIKVVVIRESRAVDFAR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgggagaactttccctggccgcgctgactggcgcgctgggtatggtcgcggccgtgatc
gcctttgtgtttgggcgtcgctcgggccgccaggccgagatcggcgaacagcagcgtgcc
aaggcgaccgctgaagacacggccggacgcatcctcgacgaggcgcgtcgtgaagccgac
acccttcgcaagggtgccatcgtctccggcaaggaagaggtgctgcagctccgggagacg
cacgagcaggagttccgtcagcgtcgggtcgacgtggagcgcgaagaaaagcgcattctg
gagcgcgaatcgcaggtggatcgggtgcgtgaaggcctcgagggacgggagctcgaggtg
cagcggcgcggcaaggagctgacccagcgggaggacgccgccacggcgcgttcactggaa
ctcgacaccctctttgccgacgaacgtcgccgtctcgaacagatcgccgggctgagtgcc
gatcaggccaaggccgaactggttcggcgcctcgaagacgaagcgctggccgatgccgcc
agccggttgcgagagattcgggaatcggccaagcgcaatgcagaccgtgaagcccggaaa
atcgtggcgctcgccgtgcagcgtgtcgccgccgaaaccaccgccgaaacgacagtgtcg
gccgtggcgctgccgaacgatgagatgaagggccgtatcatcggccgagaggggcgcaac
attcgcgccttcgaactggccaccggtgtcgatgtcatcatcgacgatacgccggatacg
gtggtggtgtcctgcttcgatccggtgcgtcgtgagacggcgcgcctggcactcgaaaag
ctggtgagcgatggtcgcatccatccgggacgcatcgaagaagtggtggccaaggcccgc
cgtgaggtggaggtggccatcgtggagaccggtgaacaggccgcgtacgaagtcggcatc
accggtctgcatcccgagctgatcaagctcatcggccgcatgaagtggcgcaccagctac
gggcagaatatcctcgcgcacagcaaggaagtggcctggctggccggcatgatggccgcc
gagctggggctcgacgtggcgctcgccaagcgtggtgcgctgttgcacgacatcggcaag
gtgctcacgcacgaacacgagggcacccacgtgcagcttggcgtggagatggccaccaag
tacggcgaaaacccgctggtggtgaactgcatcgccgcccatcatgacgatgtaccacac
gagagcgaagtctcggtgctcgtacaggccgccgacggcatttcgggttcacgtcccggt
gcgcgccgcgaagcattcgaaacctacgtgaagcgtctcgaaggcctcgaacgcattgcg
tcgagctatcgcggcgtggaacgcgtgtttgccattcaggcgggccgcgaagtgcgcgtt
gtggtcacccccgagcaggtcgacgacctgcgcatggcggcgctctcggaagagattgcg
cgccgtatcgaatccgagttgcagtatcccggccagatcaaggtcgtggtcatccgagaa
agccgagcggtggactttgcgcgctga
DBGET
integrated database retrieval system