Gemmatimonas aurantiaca: GAU_1973
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Entry
GAU_1973 CDS
T00878
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GAU_1973 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gau03021
]
GAU_1973 (rpoA)
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_1973 (rpoA)
Enzymes [BR:
gau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GAU_1973 (rpoA)
Transcription machinery [BR:
gau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GAU_1973 (rpoA)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GAU_1973 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAH39015
UniProt:
C1A4J0
LinkDB
All DBs
Position
complement(2308397..2309470)
Genome browser
AA seq
357 aa
AA seq
DB search
MATIDLSGLVRPQLVEATKREDSPNLAEFRLQPLERGFGHTLGNAMRRLLLSSLRGSAVW
AFRIDGVVHEHQTIGGVVEDVHQIIGNLKTLTLALPDEVEQTVLRISKSGPGTVTAADII
ATGGVRIIDPSHHIFTITGERDFNIELYVNKGRGYIESDQHPADKNLSVDVVRIDAIYSP
VRRVNFTVAETRVGQRTDYDRLTLTVETNGTMSPEEAVSYAAALAQTHFQYFVGFGSSAS
AQPGTAGDGANSDAIRLAELFRTPIDDLELSVRSVNSLKNSNIRSLGDLVRQTEAQILQV
KNFGKKSLQEIAALLEKEGLNFGMRYEESADGVRILDMGTPPSRAAENAPDEDDDED
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcgatctttcagggcttgtccgcccgcagcttgtcgaagcgaccaagcgc
gaggacagtcccaatctggccgaattccgtctgcagccgctcgaacgcggcttcggacac
acgctgggcaacgcgatgcgccgactgctcctgtcgtcgctgcgtggctccgccgtgtgg
gcgttccgtatcgatggcgtggtgcatgagcaccagaccatcggcggcgtcgtggaagac
gtgcaccagatcatcggcaacctgaagacgctgacgctcgcgctgcccgatgaagtggag
cagaccgtgctccgcatcagcaagtccggcccgggtaccgtcaccgccgcagacatcatc
gcgacgggcggtgtgcggatcatcgatccgtcacatcacatcttcacgatcaccggcgag
cgcgatttcaacatcgagctctacgtgaacaagggtcgtggatacatcgagagcgaccag
caccccgccgacaagaacctttcggtcgacgtggtccgtatcgatgccatctacagcccg
gtccgtcgtgtcaacttcaccgtcgcggaaactcgcgtcggacagcggaccgactacgac
cgcctgacgcttaccgtcgaaaccaacggcacgatgtcgcccgaggaagcggtgagctac
gccgccgcgctggcccagacccacttccagtacttcgtgggctttggttcctccgcgtcc
gcgcagcccggtacggccggtgacggcgccaacagcgacgccatccgtctcgccgagttg
ttccgtaccccgatcgacgatctcgaactctcggttcgttcggtcaactccctgaaaaac
tccaacatccgctcgctcggcgatctggttcgccagaccgaggcgcaaatccttcaggtc
aagaacttcggtaagaagtccttgcaggaaatcgccgcgctgctcgagaaggaagggctc
aattttggtatgcgctacgaagagagtgcggatggtgtccgcatcctcgacatgggcacc
ccgcccagccgcgctgccgaaaatgcgcccgacgaagacgacgacgaggattga
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