Gemmatimonas aurantiaca: GAU_2385
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Entry
GAU_2385 CDS
T00878
Symbol
fdsA
Name
(GenBank) formate dehydrogenase alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau00630
Glyoxylate and dicarboxylate metabolism
gau00680
Methane metabolism
gau01100
Metabolic pathways
gau01120
Microbial metabolism in diverse environments
gau01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GAU_2385 (fdsA)
09102 Energy metabolism
00680 Methane metabolism
GAU_2385 (fdsA)
Enzymes [BR:
gau01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GAU_2385 (fdsA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_Nqo3
Fer4_7
Fer4
Fer4_10
Fer4_9
Fer4_21
Fer4_6
Fer4_15
Fer4_16
Fer4_2
Fer4_17
Fer4_8
Fer4_4
Fer4_NDSU1
Motif
Other DBs
NCBI-ProteinID:
BAH39427
UniProt:
C1AB21
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All DBs
Position
2795994..2798750
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AA seq
918 aa
AA seq
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MIKPALDLSAAAATPLIDITIDGMTTSVPAGTTVMQAAKTVGVDIARLCANDTLKPFGSC
RLCVVDIAGRKGLPASCTTPVDHGMVVRTQTPQLARVRRNVMELYISDHPLDCLTCAANG
DCELQDMAGAVGLREVRYGYGGENHLEAEKDESNPYFTFDPSKCIVCSRCVRACDEIQGT
FALSITDRGFASKVSAGMGEAFLNSECVSCGACVQACPTATLTEKSIIDAGQPDRVVKTT
CAYCGVGCSFDAELKGNDVVRMTPSAEGGANEGHSCVKGRFAWGYATHSDRVLHPMVREH
IDDPWRQVSWEEAIQFAAARFRAIQDEHGREAIGGVSSSRCTNEEVYVVQKMVRAAFRNN
NIDTCARVCHSPTGYGLKQTFGTSAGTQDFKSVAHADVILVIGANPTDAHPVFAARMKRR
LRQGAKLVVIDPRRIDLVRSPHIQAAHHLQLRPGTNVAVINALAHVIVTEGLVNDTFVGE
RCDAVSFTQWRDFIAQPEHSPEATEAHSGVPAAEVRAAARLYAGAGNAAIYYGLGVTEHS
QGSTMVLGIANLAMAAGQIGRDGTGVNPLRGQNNVQGSCDMGSFPHELPGYRHISDNAVR
GRFEEAWHTTLDHEPGMRIPNMLSAAVAGAFRGMFVQGEDIAQSDPNTIHVTDALRAMDC
VVVQDLFLNETAKYAHVFLPGTAFLEKDGTFTNAERRINRVRPVSPSRTGMSEWEVVCRL
STAMGYPMGYDNASQIMDEIAALTPTFAGVSFSHLDQVGSVQWPCTTDTPLGTRVMHEQA
FVRGKGRFLVTQYVPTDERSTRKFPLLLTTGRVLTQYNVGTATRRTPNTMWHDEDVLEMH
PHDAEVRGVSSGDGVLLSSRKGAITLHARVTDRVPEGIVYTTFHHPEAAANVVTTEFSDW
ATNCPEYKVTAVEVRPVD
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacccgccctcgatttgtccgctgctgcggcgacgcctctgatcgacatcacc
atcgacggcatgaccacgtccgtgcccgccggcactacagtgatgcaggcggccaagacc
gtgggcgtggacattgcgcggctgtgcgccaacgacaccctgaagccctttggctcctgt
cgcttgtgcgtggtggatatcgcggggcgaaaggggttgcccgcgtcctgcaccacgccc
gtggaccatggcatggtggtgcgcacccaaacgccgcagctcgcccgtgtgcgacgcaac
gtgatggagttgtacatctccgatcacccgctcgactgcctcacctgcgccgccaatggc
gactgcgaattgcaggacatggccggcgccgtggggctgcgggaagtgcgctacggatac
ggtggggaaaatcacctcgaggccgagaaagacgagtcgaatccgtacttcacgttcgac
ccgtccaagtgcatcgtctgctcgcgttgtgtgcgggcctgcgatgaaatccagggcacc
tttgcgctgagcatcaccgatcgtggatttgcgtccaaggtgagcgctggcatgggtgaa
gcgttcctgaactccgagtgtgtctcgtgtggtgcctgcgtgcaggcctgccccaccgcc
acgctcaccgaaaagagcatcatcgacgccggccagccggaccgcgtggtgaaaaccacc
tgcgcctactgcggcgtgggctgttctttcgacgcagagctcaagggcaacgatgtcgtg
cgcatgacgccctcggccgagggcggtgccaacgaaggccactcctgcgtgaagggccgg
tttgcatggggctatgccacccacagcgatcgagtgctgcacccgatggtgcgtgagcat
atcgatgacccctggcgccaagtcagttgggaggaggccatccagtttgcggcggcacgc
tttcgtgccattcaggacgaacatggccgcgaagccatcggcggtgtttcgtcgtcacgc
tgcaccaacgaagaagtgtacgtggtgcagaagatggtccgcgcggccttccgcaacaac
aacatcgacacctgcgcccgggtgtgccattcgcccaccggctacgggctcaagcagacc
ttcggcacgtcagccggcacccaagacttcaaatcggtggcccatgccgatgtgattctg
gtgattggcgccaaccccaccgacgcgcatccggtgtttgccgcccgcatgaaacgtcga
ctgcggcagggcgccaaactcgtggtgatcgatccccgacgcatcgacctggtacggtcg
ccgcacattcaggcagcgcatcacctgcaattgcgccccggcaccaacgtggcggtcatc
aatgcgcttgcccatgtgatcgtgaccgaaggcctggtgaatgacacgtttgtcggcgaa
cgctgtgacgcggtgtcattcacacagtggcgcgacttcatcgcgcagccggagcattct
cccgaagccaccgaggcgcactccggggtgcctgcggccgaggtccgtgcagcggcacgc
ctgtacgctggcgccggcaacgcggccatctactacggtctgggtgtcaccgaacacagt
cagggcagcaccatggtgcttggcatcgccaatctcgccatggcggccggtcagatcggt
cgtgacggtactggcgtgaacccccttcgtggccagaacaatgtgcagggatcctgcgac
atggggtcctttccgcacgaactgcccggctatcggcacatctccgacaatgcggtgcgt
ggccgcttcgaagaagcgtggcacaccacgctcgatcacgaaccggggatgcgcatcccc
aacatgctctcggcggcggtggcgggcgcctttcgcgggatgttcgtgcagggcgaagac
attgcgcagtccgaccccaacaccatccacgtgaccgatgcgttgcgtgccatggactgc
gtggtggtacaggatctgtttctcaacgaaacagccaagtatgcccacgttttcctgcct
ggtacggccttcctcgaaaaggatggcaccttcaccaatgccgagcgacgcatcaatcgg
gtgcgtcccgtgtcgccgtcgcgcaccggcatgtcggaatgggaggtggtctgtcggctg
tccacggcgatgggatatcccatgggctatgacaacgcgtcgcagatcatggacgagatc
gcggcactgacacccacgtttgccggcgtctccttctcccacctcgaccaggtgggcagt
gtgcagtggccctgcaccacggacacccccctcggcacacgcgtcatgcacgaacaggcg
tttgtgcgcggcaaggggcggttcctcgtcacgcaatacgtacccaccgacgagcgctcc
acacgcaagttcccgctgctgctcaccaccggccgcgtgttgacgcagtacaacgtgggc
acggccacgcggcgcacccccaacaccatgtggcacgacgaggatgtgttggagatgcat
ccgcacgacgccgaggtgcgtggcgtgagctccggggatggggtgctgctctccagccgc
aaaggcgccatcacattacacgcccgggttaccgaccgagtccccgagggaatcgtctac
accacgttccatcaccccgaggccgccgccaacgtggtcaccaccgagttctccgattgg
gcgaccaactgcccggagtacaaggtgactgccgtggaggtgcgcccggttgactga
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