Gemmatimonas aurantiaca: GAU_2434
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Entry
GAU_2434 CDS
T00878
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase/AP lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GAU_2434 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_2434 (mutM)
Enzymes [BR:
gau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GAU_2434 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GAU_2434 (mutM)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GAU_2434 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Lar_restr_allev
Ribosomal_S13
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAH39476
NITE:
GAU_2434
UniProt:
C1AB70
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All DBs
Position
2854777..2855616
Genome browser
AA seq
279 aa
AA seq
DB search
MPELPETETIARDLHAMVVGSVVRDVSVPRPDVLREIAAADLCSALSGGRITRVWRRAKL
IVLDLTLADRQNSHLVVQPRFTGGLLVDDGTLPTSEFAYSCVAMSLGDGRTLHYRDVRRL
GTVALMPEARFLEYSSGLGPEPLDQTFDATAFSGCVRLSHQSIKVVLMDQRRLAGVGNIY
ANEALWRAGIDPSREASSLTFAEAERLHTALRDVLTASIAARGTSFRDYRDARGERGTFV
EQLAAYGRGGEPCPRCGRRLVVTHAVDGRSTVFCPGCQF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgaactgccggaaacggagaccatcgcgcgcgatctgcacgcgatggtggtgggc
agcgtggtgcgggatgtttcggtgccccgccccgatgtgctgcgtgagattgccgcagcg
gatttgtgcagcgccttgtctggtgggcgcatcacccgggtgtggcgccgcgccaagctg
atcgtgctcgacctcacgctggccgataggcagaacagccacctcgtggtgcagccgcgc
ttcactggtgggctgctggtggacgacggcacgttgccgaccagcgagtttgcctacagt
tgtgtggcgatgtctctcggcgatggtcgcaccctccactatcgcgacgtgcgccggctg
ggcacggtggcgctgatgccagaggcgcgatttctcgaatattcgtcggggctgggcccc
gagccccttgaccaaacattcgacgcaactgcattttcgggttgtgttcggttatcgcat
cagtccatcaaagtcgttttgatggatcagcggcgattggccggcgttggcaacatctac
gcgaacgaggccctgtggcgcgccggcatcgatccttcccgagaagcttcctcgttgacg
tttgccgaggcagaacggctgcacaccgcgttgcgcgacgtgctgacggcgagcatcgcg
gcccgtggcaccagtttccgcgactatcgggatgcgcgaggtgagcgtggcaccttcgtt
gagcaactggccgcctacggacgcggcggggaaccctgccctcgctgcggtcgacggctc
gtggtcacccacgccgtggacggccgcagcacggtcttctgcccgggctgccagttctag
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