Gemmatimonas aurantiaca: GAU_2562
Help
Entry
GAU_2562 CDS
T00878
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03030
DNA replication
gau03430
Mismatch repair
gau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GAU_2562
03430 Mismatch repair
GAU_2562
03440 Homologous recombination
GAU_2562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gau03032
]
GAU_2562
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_2562
Enzymes [BR:
gau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GAU_2562
DNA replication proteins [BR:
gau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GAU_2562
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GAU_2562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BAH39604
UniProt:
C1AA06
LinkDB
All DBs
Position
3004285..3005256
Genome browser
AA seq
323 aa
AA seq
DB search
MDAEQHAQHETMVEALELSGDYQVLRRLVVPAFYHAPDAAPPGTPLMRGLVVDVETTGLD
TARDVIIEFGAVPFDFDGEGRVYTVHPPLSYFEDPGRPIPAEASAITGITDDDVRGKRID
DAAVLAALDQAVLVIAHNAGFDRRMLERRLPAFAAKHWACSQQEVPWVRFGSRSQKLDYL
LYRIARAFHTGHRAADDCLATLHLLASAHPVSPSDSSDDVEDVRSAVQIAPLQLLLQHAR
RRTYRLWATGTPIEVKDVLKAHGYRWFPGSEQRQKGWYRDLTSDDALAEEQVWLQEHGYG
GRVNPNWKVEKFTALERYSERMG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcggaacagcacgcgcagcacgaaacgatggtggaggcgctggagttgtcgggg
gactatcaggtgctccgtcgactggtcgtgccggccttttaccacgcaccggatgcggca
ccgccagggacgccgttgatgcgtggtctggtggtggatgtggagaccaccggcctcgac
acggcacgcgatgtcatcatcgagtttggcgccgtgccgttcgatttcgatggggagggt
cgggtgtacacggtgcacccgccgttgtcgtacttcgaagatccgggacggccgattcct
gccgaagcttcggccatcacgggcatcacggatgacgatgtgcgtggcaagcgcatcgac
gacgctgcggtgttggccgcgctcgatcaggccgtgctcgtcatcgcgcacaatgcgggt
ttcgaccgtcgcatgctggagcgccgactaccagcgttcgcggccaaacattgggcgtgt
tcgcagcaggaagtgccgtgggtgcgttttggcagtcgcagccagaagctcgactacctg
ctctaccgcattgctcgcgcgtttcacacgggccatcgcgccgccgatgactgcctggcc
accctgcatctgttggcatctgcgcatccggtgtcgccgagcgattcgtccgacgatgtg
gaggatgtgcgatcagcggtccagatcgcgccgctgcaattgctgctgcagcatgctcgt
cgacggacgtaccgcttgtgggccaccggtacaccgatcgaagtgaaggacgtgctcaag
gctcacggctatcgttggtttcccggcagcgagcagcgtcagaaggggtggtaccgtgat
ctgacgtccgatgatgcgctggccgaggagcaggtgtggctgcaggaacacgggtacggc
ggtcgcgtgaatcccaactggaaggtggagaagttcacggcattggagcgctattccgag
cgcatgggttga
DBGET
integrated database retrieval system
