Gemmatimonas aurantiaca: GAU_2751
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Entry
GAU_2751 CDS
T00878
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GAU_2751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gau03021
]
GAU_2751
Transcription machinery [BR:
gau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GAU_2751
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
AAA_33
HTH_10
HTH_11
PCI
DUF2774
Motif
Other DBs
NCBI-ProteinID:
BAH39793
UniProt:
C1AAJ5
LinkDB
All DBs
Position
3236436..3236984
Genome browser
AA seq
182 aa
AA seq
DB search
MTDSDLLARLRDGDHAAFDTIFREWYPPVVRAANRILHEPGVAEELAQDVFLELWRRRES
LPDGSSIPGYLLQAARNRALNHLRHLQGRRKTQVFVEALVEPAEHADADTQAAELEVAIR
DAIAELPPRTREVFLMSRERNLRYSEIAEQLGVTVKAVEANMSRALRQLREKLSPFLNRG
DD
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgattccgatctgctggcccgtctgcgcgacggcgaccatgcggcgttcgacacg
atcttccgggagtggtatcccccggtggtgcgggccgccaatcggatcctgcacgagccg
ggtgtggccgaagaactggcccaggacgtcttcctggaactgtggcgtcgacgggaaagc
ttgcccgatggcagcagcattccgggatacctgttgcaggcggcgcggaatcgtgcgctc
aatcatctccgccacctgcagggacgtcgcaaaacccaggtgttcgtggaagcgctggtc
gaaccggccgagcacgccgatgctgacacccaggccgcggagctggaggtcgccatccgc
gatgccattgccgaattgccaccgcgcacacgtgaagtgtttctcatgagccgtgaacgc
aatcttcgctacagcgagattgccgaacaattgggtgtaacggtcaaggccgtggaagcg
aacatgagtcgcgcgctccgccaattgcgtgaaaaactgtcgcccttcctgaaccgcggc
gacgactga
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