Gemmatimonas aurantiaca: GAU_2770
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Entry
GAU_2770 CDS
T00878
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GAU_2770 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gau03019
]
GAU_2770 (rhlE)
Enzymes [BR:
gau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GAU_2770 (rhlE)
Messenger RNA biogenesis [BR:
gau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GAU_2770 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_19
Cas3-like_C_2
P-loop_SecA
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAH39812
UniProt:
C1AAL4
LinkDB
All DBs
Position
complement(3258371..3259495)
Genome browser
AA seq
374 aa
AA seq
DB search
MTFADLGLARPLLDALHDAGYERPTPIQREAIPLALLGRDLIGLAQTGTGKTASFTLPVV
HRLLGGPRRTRVLVLTPTRELCLQVEESVRKYSSRSPVDVIPVYGGVGYEPQEKALRRGV
DVVVATPGRLLDHLEKRNVDFTYLETLVLDEADRMLDMGFAPQINRIVDQIPRYRQTLLF
SATMPPEVEALGRKYLRKPVVVQVGRRSSAATTVTHAVYPVPRHRKNELLVHLLTNSDHE
SVLVFTRTKSGADRVVSDLAQAKIHAGAMHADKSQRERIQALEDFKSGKLRVLVATDIAQ
RGLDISGITHVINFDVPQQPEDYVHRIGRTGRAASTGDAYTFMSAEEIGMVRTIERTIGQ
EIPRVSVPGFDFGT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttcgctgacctcgggcttgcacgcccgctgctggatgccctgcacgatgccggg
tacgaacggcccactcctattcagcgtgaggctattccgctggccctgctggggcgggat
ttgattgggctggcccagacgggtaccggtaagacggcgagcttcacgctccccgtcgta
catcggctgctcggtggcccgcgccgcacccgcgtcctcgtgctcacccccacccgcgaa
ctgtgtctccaggtggaggagagtgtgcggaaatactcgagtcgctcgccggtggatgtg
attccggtatacggcggcgttgggtatgagccgcaggaaaaggcgctgcgtcgcggtgtg
gatgtggtggtcgccacgccaggccgtctcctcgatcatctcgagaagcgcaacgtcgac
ttcacatacctcgaaacgctggtgctcgacgaagccgaccgcatgctcgacatggggttt
gcgccgcagatcaaccgcatcgtcgaccagatcccgcgctatcggcagacgctactgttc
agcgcgacgatgccgccggaagtcgaagcgctgggtcggaagtatctgcgcaagccggtg
gtggtgcaggtggggcgtcgttcgtcggcagccaccaccgtcacccacgccgtgtacccc
gtgccgcgccatcgcaagaacgaactgctggtgcacctgctcaccaacagcgatcacgag
tcggtgctggtgttcacgcgcaccaagagtggcgccgatcgggtggtgagtgatctggcg
caggcgaagatccacgccggggccatgcacgccgacaagtcgcaacgcgaacgcattcag
gcgctcgaggacttcaagtcgggcaagctgcgcgtgctggtggccaccgacatcgcgcag
cgtggactcgatatctcgggcatcacgcatgtgatcaacttcgacgtgccgcagcagccc
gaggactatgtgcaccgcatcggccgtaccggtcgcgcggccagcacgggtgatgcatac
acgttcatgtcggcagaagagatcggcatggtgcgtaccatcgaacgcaccatcggccag
gaaattccccgcgtcagtgtgcccgggttcgatttcggtacctga
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