Gemmatimonas aurantiaca: GAU_3200
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Entry
GAU_3200 CDS
T00878
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau00541
Biosynthesis of various nucleotide sugars
gau01100
Metabolic pathways
gau01250
Biosynthesis of nucleotide sugars
Module
gau_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GAU_3200 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gau01005
]
GAU_3200 (rfaD)
Enzymes [BR:
gau01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GAU_3200 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
gau01005
]
Core region
GAU_3200 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Sacchrp_dh_NADP
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BAH40242
UniProt:
C1ACL5
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All DBs
Position
3788451..3789494
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AA seq
347 aa
AA seq
DB search
MTEANSHRPLPLLSVLDTLPTRVLVTGGAGFIGSALVWALNQQGVDRIVIADRLGQDEKW
RNLVPLRFEDYLEADDLFPRLESGALGDFDLILHLGACSATTELDATYLARNNFEFTKQL
AHRALARGSRFVYASSAATYGDGAHGMDDIDNSSAALSRLRPLNAYGYSKHLFDQYAAQA
GLLHRIVGLKYFNVYGPNEAHKGDMRSLVHKAFGQIRDTGRVRLFRSHRVDYKDGEQQRD
FLYVKDAVAMTLHLAMSPAAGGLYNIGSGQAHSWLELTGALFAALGREPEIEFIDIPESI
RAKYQYHTKAEIAKLRAAGYAALVTPLADAVRDYVQGYLTDDRRLGD
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagcgaattctcaccggcccctgccactcctctctgtactcgacacgctgccc
acacgcgtactcgtcacgggtggtgccggcttcatcggcagcgcgctggtctgggccctc
aatcagcagggcgtcgaccgcatcgtcatcgccgatcggctcgggcaggacgagaagtgg
cgcaacctcgtcccgctgcggttcgaggactacctcgaggccgacgatctcttcccgcgt
ctcgagtcaggggcattgggagatttcgacctcattctccacctcggcgcctgttcggcc
acgaccgagctcgatgcgacctatctcgcgcgcaacaacttcgagttcaccaaacagctc
gcccaccgggcgctcgcgcggggatcacgattcgtgtacgcgtcgagtgccgccacgtat
ggcgacggcgcacacggcatggacgatatcgacaattcgtccgccgcgctctcgcggctt
cgtccgctgaacgcgtacggttactccaagcacctgttcgaccagtatgcggcgcaggcc
gggctgctgcatcggattgtgggactcaagtacttcaacgtgtacggccccaacgaagcg
cacaaaggcgatatgcgctcgctcgtccataaggccttcgggcagatccgcgacaccggc
cgcgtccggctctttcgctcacaccgggtcgactacaaggatggcgagcagcaacgcgac
ttcctctacgtgaaggacgcggtggccatgacgttgcacctggccatgtcaccggcggcc
ggtggcctgtacaacatcggcagcggccaggcacactcgtggctcgagctcaccggcgcc
ctgttcgccgcactcggtcgtgaaccggagatcgagttcatcgatattcccgagtccatc
cgcgccaagtaccagtatcacaccaaggccgagatcgcgaagctacgggcggccggatat
gcggcgctcgtgacgccattggcggacgccgtgcgtgactatgtgcagggttacctcacc
gacgaccggcgtctgggagactga
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