Gemmatimonas aurantiaca: GAU_3913
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Entry
GAU_3913 CDS
T00878
Symbol
holA
Name
(GenBank) putative DNA polymerase III delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
gau
Gemmatimonas aurantiaca
Pathway
gau03030
DNA replication
gau03430
Mismatch repair
gau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GAU_3913 (holA)
03430 Mismatch repair
GAU_3913 (holA)
03440 Homologous recombination
GAU_3913 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gau03032
]
GAU_3913 (holA)
03400 DNA repair and recombination proteins [BR:
gau03400
]
GAU_3913 (holA)
Enzymes [BR:
gau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GAU_3913 (holA)
DNA replication proteins [BR:
gau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GAU_3913 (holA)
DNA repair and recombination proteins [BR:
gau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GAU_3913 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BAH40955
NITE:
GAU_3913
UniProt:
C1AEM8
LinkDB
All DBs
Position
complement(4612406..4613563)
Genome browser
AA seq
385 aa
AA seq
DB search
MPPRAAAPSKEASPLRTVQAAVQARQFDPVYYLHGDDDYLKDGAIRDLLDAAIDPSTRDF
NSEMRRAGDIDAETLGSLLNTPPMLAERRALVLRDVTALKKAARAQLDRYLARPASDTLL
LLVSPAGSKVDTALVEASTSLAFTPLTPERVRRWITHHAGTALNIDIAADAAELLQQAVG
NDLHLLAAELDKCASYVLGAQDAAGTTGTASDHASNAAPDITRATIDADAVSAVVGVRRG
ETVADLLDAVARQDAAVAITLVGHVLGQPKVTGVQIVMMLSTQAFALSFGRARRDAGVPT
NRLPQEYFAFLKETGGFPGRPWGDAASAWTKVTERWSRAACDRALRLLLEADMALKETTV
SNAEQILMSLILGLCATRTSARSAA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgccgccacgagccgctgcccccagcaaggaagcgtcacccctgcgcaccgtgcaggcg
gccgtccaggcgcgccagttcgatcccgtgtattacctgcacggtgacgacgactatctg
aaggacggcgcgatccgcgatttgttggacgcggccatcgacccgagtacgcgcgatttc
aattccgagatgcgtcgcgctggcgatatcgacgccgagacgctgggcagtctgttgaac
accccgcccatgttggccgagcgtcgcgcgctggtgctgcgcgatgtgacggcgctcaaa
aaggcggcgcgggcccaactcgatcggtatctcgcccgtccggcttccgatacgctgctg
ctgctggtgagtcccgctggcagcaaggtggacaccgcgctcgttgaagcctccacctca
ctggccttcacaccgctgacgcctgaacgggtgcgccgatggatcacccatcacgctggc
accgcgctcaatatcgatatcgcggctgatgccgccgagttgttgcagcaggcagtgggc
aacgacctgcacctgttggccgccgagttggacaagtgtgcgagttatgtgctcggcgcg
caggacgccgcgggtacgacgggtacggcgtcagaccatgcatcgaatgccgcaccggac
atcacacgcgccaccatcgatgcggatgccgtttctgccgtcgtgggcgtgcggcgcgga
gagaccgtcgccgatctgctggatgcggtggcccgtcaggatgcggcggtggccatcacg
ctcgtggggcatgtgttgggacaacccaaagtcaccggcgtgcagatcgtgatgatgctg
agtacacaggcctttgcgctgtcgttcggccgggcgcgccgcgatgcgggtgtgcccacc
aatcgcctgccacaggagtacttcgcttttctcaaggaaacaggcggatttcccggtcgg
ccatggggtgatgcggcgtcggcctggaccaaggtgacggagcgatggagtcgcgcggcg
tgtgatcgtgcgctccggttgttgctggaagcagatatggcactcaaggaaaccacggta
tcgaatgcggagcagatcctgatgtcgctgattctcgggctgtgcgccacacgcacgtcg
gcgcggagcgcggcatga
DBGET
integrated database retrieval system
