| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase
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| KO |
| K16898 | ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] |
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| Organism |
gav Gordonia alkanivorans
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| Brite |
KEGG Orthology (KO) [BR:gav00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:gav03400]
C5O27_00125
Enzymes [BR:gav01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5O27_00125
DNA repair and recombination proteins [BR:gav03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C5O27_00125
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(25503..28745)
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| AA seq |
1080 aa
MTAAQLADQAARDRITTDTDATLFVEAGAGSGKTHSLVGRICHLVLHDGIELDAIAAITF
TEKAAAELRERVRVELATHDTDRARAALEQIDTAAIGTLHAFAARIIGEHPLEAGVPPRI
AVVDAMGSQLSFERRWRRMRTRLFTDDASPMLVDAMGIVMAAGASLDQMRTLADALDRNW
DRLTLDDDPQGIAPADIDRILWETDTIIDKLDDCLDPEDKLAVKLEELREWRILVAAERD
SFGWVPMVDLCPKLGNVGRGSAWRGGVAQCKEIKAAAKALREEICSDVVGTYVDGAVRVV
VRHLSEIVLDEARERQRSGQLEFHDLLVLARDVLGKPEVAAAAHRRYQRVLLDEFQDTDP
LQLTLAQRIVAGRDEAGRLFTVGDPKQSIYRFRRADIAAYMSARDRTPPADVVQLTTNFR
STRPVLDWVNAVYGRLIVAEHHVQPDYTPLDPAPGRPRWDVSWGPKPFVFPDTEEPVDDE
DALSPAEALRARESRDVARIIATAVEIGWRKETFDGDAYEHVPLRWKDICILIPSRAVLP
FLEKSLDAAGIEFRSEASSLVYSTQEVHDLLVTCRALANTADEAALVAALRTPLFGCGDD
DLLRWKAADGRWSIYADAPTDALTESPVAAACAYLKALSSELGDLNPGALLSRLATDRRV
FEVSMDSPRHRDVWRRLRFVIDQARAWYAEDRGSLRDYIDWAATQADENARVAETVLPEI
GVDAVRIMTIHAAKGLQFPMVVVAGMSGGFRTQPEPLLWDEDEKLQACASKNVASKGYAA
AAKTEKAHAEAEKKRLLYVACTRAESHLAVSGYVGKNASWGAALAPALEGLPNDVPELVE
PVRRDDEAIAQHERQAWVDWSAETAAIETASTLRVSYSATRIVHGVDDAETVVLQGYRDS
GRLTAPVAEQIPVGTASPDSGATLGTALHALLEQVALGTAVDDEFDETARRAAALAGVVD
VDHFVALARSALQSAPVQRAAVREHWKEMQLAGPGPDGATVVEGIADLVYRDDDGSLVIV
DYKTDVGVSAETLEAYWAQLAIYADLLRNATGEKVSRLQLVFCRPGQAAVVERALRPADR |
|---|
| NT seq |
3243 nt +upstreamnt +downstreamnt
atgaccgcagcacaactcgccgaccaggccgcgcgcgatcgcatcaccaccgacaccgac
gccaccctgttcgtcgaagccggcgccggcagcggcaaaacccattcgctggtcggccgc
atctgtcacctcgtgctgcacgacggcatcgaactcgacgccatcgccgccatcaccttc
accgagaaagccgcggccgaactccgtgaacgcgtgcgtgtcgagctcgccacacacgac
accgaccgtgcgcgagccgctctggaacagatcgacaccgccgccatcggtacgctgcac
gcgttcgcagcccgcatcatcggcgagcatcccctcgaagccggtgtgccaccacgcatc
gcggtcgtcgacgccatgggctcccagctgtccttcgaacgccgctggcgtcgcatgcgc
acccgactgttcaccgacgacgcctcacccatgctggtcgacgccatgggcatcgtgatg
gccgccggcgcatcgctcgaccagatgcgcacactcgccgacgcattggaccgcaactgg
gatcgcctcaccctcgacgacgatccgcagggcatcgcacccgccgacatcgaccgcatc
ctgtgggagaccgacaccatcatcgacaagctcgacgattgtctcgatccggaggacaaa
ctcgcggtcaaactcgaggaactccgcgaatggcggatcctggttgccgccgaacgtgat
tccttcggatgggtcccgatggtggacctgtgcccgaagctcggcaacgtgggtcggggg
tccgcgtggcgcggtggtgtggcgcagtgcaaagagatcaaagccgccgccaaggcgctg
cgcgaggagatctgctccgacgtggtcggcacctacgtcgacggcgcggtgcgcgtggtg
gtccgccacctgtcggagatcgtcctcgacgaggcgcgcgagcggcaacgcagcggacag
ctcgaattccacgacctgctcgtcctggcccgcgacgtactcggaaagccggaggtcgcc
gcagccgcccatcggcgctaccagcgagtcctcctcgacgagttccaggacaccgatccg
ctgcaactcacactggcacaacgcatcgtcgccggtcgagacgaagccggtcggctcttc
accgtcggcgacccgaaacaatccatctaccgcttccgccgcgccgacattgcggcgtac
atgtccgcgcgggatcgcacgccgccggccgacgtcgtgcagctgaccaccaacttccgg
tccacgcgtcccgtcctcgactgggtcaacgccgtctacggccggctcatcgtcgccgag
catcacgtgcagcccgactacacgccgctcgacccggccccgggccgaccccgctgggac
gtctcctgggggcccaagccgttcgtcttccccgacaccgaggaacccgtcgacgacgag
gacgcgctctcgcccgccgaagccctccgcgcacgcgagtcgcgcgacgtcgcgaggatc
atcgccaccgccgtcgagatcggctggcgcaaggagacattcgatggcgatgcgtatgag
catgtcccattgcgctggaaggacatctgcatcctcatcccgtcgcgggcggtactgccg
ttcctggagaagagcctcgacgccgcgggtatcgagttccgttcggaggcatcgagtctg
gtgtactcgacgcaagaggtgcacgacctcctcgtcacctgccgcgcactcgcgaacacc
gccgacgaagccgcacttgtcgccgccctccgcaccccgctgttcggctgcggtgacgac
gacctactccgctggaaggccgccgacggccgatggagcatctacgccgatgcgcccacc
gacgcgctcaccgaatcgccggtggcggccgcatgtgcatacctgaaggcgctgtcttcg
gaactgggggacctgaacccgggcgcactgctgagccgcctggcgacggatcgtcgggtg
ttcgaggtgtccatggattcgccccgtcaccgcgacgtctggcggcgtctccgcttcgtc
atcgaccaggcccgcgcctggtacgccgaagaccgtggctcactgcgcgactacatcgac
tgggccgccacccaggccgacgagaacgcgcgcgttgccgagaccgtgctccccgagatc
ggcgtcgacgccgtgcgcatcatgaccatccacgccgccaagggattgcagttcccgatg
gtcgtcgtcgccggcatgagcggcggattccgcacccagcccgaaccgctgctgtgggac
gaggacgagaagctgcaggcatgtgcgtcgaagaacgtggcgtcgaaagggtatgcggca
gcagcaaagaccgaaaaggcgcacgccgaggcggagaagaagcgcctgttgtacgtcgcc
tgcacgcgcgccgagagtcacctcgcggtctccggatacgtcgggaagaacgcatcctgg
ggagccgcgctcgcacccgcgctggagggtttgcccaacgacgttccggagctcgtcgaa
ccggtcaggcgcgacgacgaagcgatcgcccagcacgaacgacaggcctgggtcgactgg
tcggcggagaccgctgcgatcgagaccgcttcgacgctccgcgtctcctactcggcgacg
cggatcgtccatggcgtcgatgacgccgaaacagttgtgctgcaggggtaccgggattcc
ggacggctgacagcgccggtagccgaacagatcccggtcggcaccgcgagccccgacagc
ggcgcgacgctgggtaccgccctgcacgcgctcctcgaacaggtggccctgggaaccgcc
gtcgacgacgaattcgacgagaccgcccggcgtgcggccgcactcgccggcgtggtcgac
gtggatcatttcgtggcgctggcgcggtcggcgttgcagtcagcaccggttcagcgagct
gccgtccgcgagcactggaaggaaatgcagctcgccggtcctggacccgacggtgccact
gtggtcgagggcatcgcggacctggtgtaccgcgacgacgacggttcgttggtcatcgtc
gactacaaaaccgacgtcggagtttccgccgaaaccctcgaggcgtactgggcgcaactc
gcgatatacgccgatctactgcgaaatgcgactggggagaaagtgtctcggctacagctc
gtgttttgccggccagggcaggcggcggtcgtcgaacgtgctctgcgcccggcggaccga
tga |
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