KEGG   Gordonia alkanivorans: C5O27_00360
Entry
C5O27_00360       CDS       T05876                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
gav  Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:gav00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:gav02048]
    C5O27_00360
Enzymes [BR:gav01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     C5O27_00360
Prokaryotic defense system [BR:gav02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   C5O27_00360
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII T1RH-like_C DEAD AAA_22 RecX_HTH1
Other DBs
NCBI-ProteinID: AZZ79744
LinkDB
Position
complement(92994..96089)
AA seq 1031 aa
MSDVGQVERKAQDRVVRLFGEQLGYEYLGNWEGRAGNSNIERQLLIQNLRARGYDDNLVN
RALDKLDKAAAVGAGHDLYEANKDVYSLLRYGVKVQPGAGENFETVWLVDWATPEANHFA
LAEEVTIAGEHTKRPDIVFYVNGLALGTLELKRSKVAVSEGIRQTIGNQDKQFIRSFFST
VQFVFAGNDVEGLRYGVIDTPEKYWLEWKEPSDVEDPLDRALLQLCNKDRFLELIHDFIV
FDAGVKKGPRHNQYFGVKAAQERIAKREGGIIWHTQGSGKSLTMVWLAKWIREHQDDARV
LLITDRTELDDQIEGVFSGVNEQIYRTKSGADLISTLNASQESLMCSLVHKFREADTDTD
DDDATADIIKELNAKIPKDFKAKGNIFVFVDEAHRTQSGKMHTAMKELLPGAMFIGFTGT
PLLKADKATSIETFGSFIHTYKFDDAVKDGVVLDLQYEARNIDQDLTSPDKVDKWFEAKT
KGMTDLSKAELKKRWGTMQKVVSSEPRARQIVDDILMDMETKPRLMDKRGNAMLVGSSIY
QACKFYELFNATDLKGKCAIVTSYTPNASDISKEDSGEGKTEKLRQYDIYRRMLADYFSE
SEDAAMGKVEQFEKEVKEQFVKHPGQMRLLIVVDKLLTGFDAPSATYLYIDKKMRDHGLF
QAICRVNRLDGEDKDYGYIVDYQDLFNSLEDAITDYTSGALDGYEKKDIDGLLSDRIEKS
REDLDDALERIRALVEPVAPPKGTLQYQQYFCAKDQGNAEQLKANEPKRVELYKAVSAVS
RAYSNLANEMTDAGYSEAEAAAIKTEIAHYIDVRAEVKLGAGEEIDFKQYEAGMRYLLDT
YIRADASEVVSEFEDTGLVDLIVKLGAGAIDKLPPGIKKDPEAVAETITNNMRKVIIDEH
AMNPKYYDKMSELLDAIIEQRRQQAIDYQAYLAKLLEAAKQLGTGEGTGHSYPDWVNDGA
RKALVDFTWPDVEIARSLDEAVRTTKPDAWVGNPLKEKVVKRALRRTLPDEYGDDKLNEV
FNLVKARDEYR
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgagcgatgttggccaagtcgagcgcaaagcacaggatcgcgtagtcagactgttcggc
gaacagctcggctatgagtatcttggcaactgggaaggccgcgcgggaaactcgaatatc
gagcgccagctgctgattcaaaacctcagggcgcgcggctacgacgacaacctggtcaat
cgtgcgctcgacaagctcgacaaggctgcggcggtgggtgctggtcacgacctgtacgaa
gccaacaaggatgtctatagcttgcttcgttacggcgtgaaggtgcaaccaggcgccggt
gagaatttcgagactgtctggctcgtcgactgggccacgcctgaggctaatcacttcgcg
ttagccgaagaggtcacgatcgccggggagcacaccaagcgccccgacatcgttttctac
gttaacggcctcgcactgggaacgctggagctcaagcgctcgaaagtggcggtctccgaa
ggtatccggcagacaattggcaaccaagacaagcagttcatccgctcattcttctcgact
gtccagttcgtcttcgccggcaacgatgtcgaggggctgcgctacggcgtgatcgacacg
cccgagaagtattggctggagtggaaagagccctcggacgtcgaggacccgctcgaccgg
gcgctgctgcagctctgcaacaaagatcgcttccttgagctgatccacgacttcatcgtg
ttcgatgctggcgtcaagaaggggccgcgtcacaaccagtactttggtgtgaaggctgcg
caggaacgtatcgccaagcgtgagggtggcatcatctggcacacgcagggctcgggcaag
agtctgacgatggtgtggctcgccaagtggattcgggagcaccaggacgatgcgagggtt
ctgctgattaccgaccgcaccgagctggacgaccagatcgaaggggtgtttagcggcgtc
aacgagcagatctaccgcaccaagagcggcgcagacctgataagcaccctcaacgcgtcc
caagaatcgctgatgtgctcgctggtgcacaagttccgtgaggccgataccgacaccgac
gatgacgacgcgacagctgacatcatcaaagaacttaacgccaagattcctaaggacttc
aaggccaaaggcaacatcttcgttttcgtcgacgaggcgcaccgcacgcagtcgggcaag
atgcacaccgcgatgaaggaactgctcccgggcgcgatgttcatcggcttcactggtacg
ccactactgaaggcggacaaggccactagcattgaaaccttcggctcattcatccacacc
tacaagttcgacgatgcagtcaaagacggcgtggtactcgatttgcagtacgaggctcgc
aacatcgatcaagacctcacgtcacccgacaaggtcgacaagtggttcgaagccaagacc
aaaggcatgaccgacctatcgaaggcagagctgaagaagcgctggggcacaatgcaaaag
gttgtgtccagcgaaccgcgcgcccgccagatcgtcgacgacatcctgatggacatggag
accaagccccgcctgatggacaagcgtggcaacgccatgctggtcggttcgtcgatctac
caggcgtgcaagttctatgagctgttcaacgccaccgacctcaaaggcaagtgcgcgatc
gtcaccagctacaccccgaacgccagcgacatttccaaagaagactccggcgaaggcaag
accgagaaactgcgccagtacgacatctaccgccgcatgctggccgactacttcagcgag
tccgaagacgccgcgatgggtaaggtcgagcagttcgagaaggaagtcaaagagcagttc
gtcaagcatcctggtcagatgcggctgctgatcgtggtcgataagcttctaacaggcttc
gacgcaccgagcgccacctatctctacatcgacaagaagatgcgcgaccacggcctgttc
caggcgatctgccgcgtcaaccgactcgacggcgaggacaaggactacggctacatcgtc
gactaccaggacctgttcaactcactcgaagacgcgatcaccgactacacgtccggtgcc
ctcgacggctacgagaagaaggacatcgacggtctcctgagtgaccgcatcgagaagtca
cgcgaagacctcgacgatgcccttgagcgaatccgggcactcgtcgagcccgtagcacca
ccgaagggcacgctgcagtaccagcagtacttctgtgccaaggaccagggcaacgccgag
cagctcaaagccaacgagccgaagcgcgtcgagctatacaaagcggtgtcggcggtgtcc
cgtgcctacagcaacctcgccaatgagatgaccgatgccggctatagcgaggccgaggcg
gccgcgattaagacggagatcgcgcactacatcgacgtgcgagccgaggtaaagctcggt
gctggtgaggaaatagacttcaagcagtacgaagccgggatgcgctacctactcgacacc
tacattcgggccgatgccagcgaggtcgtatcggagttcgaagacactggcttggtcgat
ctgatcgtcaagctcggcgcaggagcaatcgacaagctgccgccaggcatcaagaaggac
cccgaagctgtcgctgagacgatcaccaacaacatgcgcaaggtgatcatcgacgagcac
gccatgaaccctaagtattacgacaagatgagcgagctactcgacgccatcatcgaacag
cgccgccaacaggccatcgattaccaggcgtacctggcaaagctgctggaagccgctaag
cagctaggcaccggcgaaggtaccggccacagctacccagactgggtcaacgacggcgca
cgcaaagcgctcgtcgacttcacctggcccgacgtcgagatcgcgcgcagtctggacgaa
gccgtgcggacaacgaagcccgatgcctgggtcggtaacccgctcaaggaaaaagtcgtc
aaacgtgcgctgcgccgcaccctgcccgacgaatacggcgatgacaaactcaacgaggtg
ttcaacctggtgaaggctcgcgatgagtaccgctag

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