Gordonia alkanivorans: C5O27_00575
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Entry
C5O27_00575 CDS
T05876
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_00575
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C5O27_00575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
DUF7125
DnaB_C
Lon_C
AAA_22
AAA_16
AAA_30
GvpD_P-loop
AAA
AAA_19
NACHT
DUF7129
RecA_N
nSTAND3
nSTAND_NTPase5
ABC_tran
AAA_14
AAA_29
NTPase_1
DAP3
Zn_ribbon_8
RsgA_GTPase
AAA_5
NPHP3_N
TsaE
DZR
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
AZZ79775
LinkDB
All DBs
Position
135275..136654
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AA seq
459 aa
AA seq
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MAKPKSSYRCTGCGHQVAKWVGRCPECSEWGSIDEVAGAPTSSRTTAAVAPSSPALRITE
VDAQSTAAVPTGIGELDRVLGRGVVPGSVILLAGEPGVGKSTLLLETVKHWAAQDRVALY
ITGEESAGQVRMRAERTGAVHANVYLAAETDLATILGHVDTVRPSLMIIDSVQTVVASGA
DGVTGGVTQIRAVTTALVSLAKNRGIAVILVGHVTKEGAVAGPRSLEHLVDVVLAFEGDK
HSTLRMVRGVKNRFGAADEVGCFEQRDDGIHQVPDPSGIFLHQRDSDVSGSVTMVTMDGK
RALVGEVQALANGTEMSNPRRAVSGLDFNRVAMVLAVLQARAGRKELGKSEVYLSTVGGM
RVTEPAADLAIALSVYSTLTQRPVPQSTVVIGEVGLGGEIRRVSAVARRLAEAKRLGFRE
AIIPAATDEELPKGIRILRVANLGDAVHLRDSDPVDAPF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaacccaaatcctcgtatcgctgcaccggctgcggtcatcaggtcgccaagtgg
gtcggacgctgccccgaatgcagcgagtggggatcgatcgacgaggtcgccggcgcaccc
acgtcctcccggacgaccgccgcggtggcgccgtcgagcccggccctgcgcatcaccgag
gtcgacgcccagtccaccgcggcggtgcccaccggcatcggggaactcgaccgcgtcctc
gggcgcggcgtcgtcccggggtcggtcatcctgctcgccggagaacccggcgtcggcaag
tcgacgctgctgctggagaccgtcaaacactgggcggcccaggatcgcgtcgcgctctac
atcaccggcgaggaatcggccggtcaggtccgtatgcgcgccgagcgcaccggcgcggtg
cacgccaacgtctacctcgccgccgaaaccgatctcgcgaccatcctcggccacgtcgac
accgtgcggccgtcgctgatgatcatcgactcggtgcagaccgtcgtcgcgtccggcgcc
gacggcgtgaccggtggcgtgacgcagatccgcgccgtcaccaccgcactggtctcgctg
gccaagaaccggggcatcgcggtgatcctggtcggccacgtgaccaaggagggcgcggtc
gcgggtcctcgttcactcgagcacctcgtcgacgtcgtactcgccttcgagggcgacaag
cactcgacgctgcggatggtccgcggcgtgaagaaccgtttcggcgccgccgacgaggtc
ggctgtttcgaacagcgcgacgacggcatccaccaggttcccgatccgtcgggaatcttc
ctgcaccaacgggattcggacgtcagtggcagcgtcacgatggtgacgatggacggcaag
cgggcgctcgtcggcgaggtacaggcgctcgccaacgggaccgagatgtccaacccccgt
cgtgcggtgtcgggcctcgacttcaaccgggtggcgatggtcctcgccgtgctgcaggcg
cgcgccggccgcaaggaactgggcaagtcggaggtctacctgtcgacggtcggcggcatg
cgcgtgaccgaacccgccgccgacctcgccatcgcgctctcggtctattcgaccctgacc
caacgccccgtcccccagtcgaccgtcgtcatcggcgaagtcggactcggcggcgagatc
cgtcgggtgtcggcggtggcgcgacgcctggcggaggccaagcggctcggcttccgcgag
gccatcatccccgcggccaccgacgaggaactcccgaagggcatccgcatcctccgggtc
gccaacctcggcgacgccgtccacctacgcgactccgacccggtggacgcgccgttctga
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