Gordonia alkanivorans: C5O27_00600
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Entry
C5O27_00600 CDS
T05876
Name
(GenBank) adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C5O27_00600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_00600
Enzymes [BR:
gav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
C5O27_00600
DNA repair and recombination proteins [BR:
gav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C5O27_00600
Prokaryotic type
C5O27_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AZZ79778
LinkDB
All DBs
Position
139971..140843
Genome browser
AA seq
290 aa
AA seq
DB search
MTNSVPPERLIGWFGTHERDLPWRDPACTGWQILVSEIMLQQTPVSRVLEPWRVWVERWP
VPSAMAVEPAGEVLRAWGKLGYPRRALRLHECSKVLARDHGDRVPDDVETMLTLPGIGDY
TARAVACFAYGQAVPVVDTNVRRVIARAVHGREHPGNPSRRDLDDAEALLPRSGAPRFSA
ALMELGALVCTARNPKCDNCPLVDCAWVRRGRPAHTGPPRKAQKFAGTDRQVRGLLLDVL
RGTTGSVDRTKLDVVWTSDTAQRDRALDSLLVDGLVEITTDGRYCLAGEG
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatagtgtgccaccggagcgattgatcggttggttcggcacccatgagcgtgac
ctgccgtggcgggacccggcatgtaccggatggcagatcctcgtcagcgagatcatgctg
caacagaccccggtctcccgggtgctggagccgtggcgggtgtgggtcgagcgctggccg
gtgccgtcggcgatggcggtcgagcctgccggtgaggtcctgcgcgcctggggcaagctc
gggtacccccggcgcgccctgcgcctccacgagtgttcgaaggtcctcgcacgtgatcac
ggcgaccgagtgcccgacgacgtcgagacgatgctcacgctacccggcatcggcgactac
accgcgcgggcggtcgcgtgcttcgcctacggccaggcggtacccgtcgtcgacaccaac
gtccgccgcgtcatcgcgcgcgcggtgcacggtcgcgagcaccccgggaacccgtcacgc
cgcgacctcgacgacgccgaggcgctgctcccccggtccggcgcgccgcggttctcggcg
gccctgatggaactgggcgcacttgtgtgcacagcacgaaaccccaagtgcgacaactgc
cctctcgtggactgtgcctgggtccgccgcggtcgtccagcgcacaccggcccaccgcgg
aaggcccagaagttcgccggcaccgaccgccaggtccgcggcctgctgctcgacgtcctg
cgcggcaccaccggttcggtggatcggacgaagctcgacgtggtgtggacgagcgacacc
gcccagcgcgaccgtgccctcgactccctgctcgtcgacgggctcgtggagatcaccacc
gacgggcgctactgccttgcgggcgagggctga
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