Gordonia alkanivorans: C5O27_01005
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Entry
C5O27_01005 CDS
T05876
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K22107
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gav03000
]
C5O27_01005
Transcription factors [BR:
gav03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
C5O27_01005
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_20
TetR_N
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AZZ79848
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Position
226683..227333
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AA seq
216 aa
AA seq
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MARSAPGNAAVDAPAGAATPAASPEAGSTAQRERRRRILDATLALASKGGYDAVQMRTVA
DKADVAVGTLYRYFPSKVHLLVTALAREFERVESKVDRSQLRGDTAIDRLRHVLDMITFA
MQRDPLLTEAMTRAFMFADASATAEVDQVAGIIDRLLAGAIVGVGEPTEEDLAIARVLSD
VWMSNLVQWLTRRASATDVTNRLELTVRLLLKDRAN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcccgctctgcaccaggcaacgccgcggtcgacgccccagcgggggccgcaacccct
gccgcgtcgcccgaagccggttccaccgcgcagcgcgaacgccgccgccgcatcctcgac
gcgacgctcgctctggcctccaagggcggttacgacgccgtccagatgcgcaccgtcgcc
gacaaggccgacgtcgcggtcggcacgctctaccgctacttcccgtccaaggtccacctg
ctggtgaccgcactggcgcgtgagttcgaacgcgtcgagtcgaaggtcgaccgctcacaa
ctgcggggcgacaccgcgatcgaccgcctgcgccacgtactggacatgatcaccttcgcg
atgcagcgcgacccgctgctcaccgaggcgatgacccgcgccttcatgttcgccgacgcg
tcggcgaccgccgaggtcgatcaggtcgccggcatcatcgaccggctcctcgccggtgcc
atcgtgggcgtgggcgaacccaccgaagaggatctcgcgatcgcccgcgtgctctccgac
gtgtggatgtcgaacctcgtgcagtggctgacccgacgcgcgtcggccaccgacgtcacc
aatcgcctcgagctcacggtccggctgctgctgaaggaccgcgccaactga
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