Gordonia alkanivorans: C5O27_02115
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Entry
C5O27_02115 CDS
T05876
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00730
Thiamine metabolism
gav01100
Metabolic pathways
gav01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
C5O27_02115
Enzymes [BR:
gav01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
C5O27_02115
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AZZ83495
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Position
464412..466103
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AA seq
563 aa
AA seq
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MGTRVSTAPTTATFTDGGLTTGPIEGSSKHYLSVDHLRVPQRRIHLTNGEHLDVYDTSGP
YTDPDAVIDVERGLPPTRDAWHRPEPVDGASTQLAWARAGIVTDEMRFIAAREGVDPDLV
RSEVAIGRAVIPANHRHPESEPMIIGKRFAVKINANIGNSAVRSSIADEVEKMVWATRWG
ADTIMDLSTGADIHTTREWILRNSPVPVGTVPIYQALEKVNGDPVALTWEIYRDTVIEQA
EQGVDYMTVHAGVLLRYVPLTARRVTGIVSRGGSIMAAWCLAHHEESFLYTHFDELCEIF
RRYDITFSLGDGLRPGSIADANDEAQFAELRTLGELTSIAKSHGVQVMIEGPGHIPMHKI
VENVRLEEELCEEAPFYTLGPLATDIAPAYDHITSAIGAAMIAQAGTAMLCYVTPKEHLG
LPDRDDVKVGVITYKIAAHSADLAKGHPRAQERDDALSKARFEFRWVDQFNLALDPDTAR
EYHDETLPAEPAKTAHFCSMCGPKFCSMRISADVRAYAEENNLVTAEDIDRKIAEGMAAK
SAEFAEAGNRVYLPLETGPGGSA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggcacacgtgtatccaccgcacccaccactgcgacattcacagacggcggtctgacc
accgggccgatcgagggcagctccaagcactacctctccgtcgatcacctccgtgtaccg
cagcgccgaatccacctgacgaacggggaacacctcgacgtctacgacacctccgggccg
tacaccgaccccgatgccgtgatcgacgtggagcgcggcctgccaccgacccgggacgcg
tggcaccgcccggaacccgtcgacggcgcgagcacccaactcgcctgggcgcgagcgggg
atcgtcaccgatgagatgcggttcatcgcggcacgggagggcgtcgaccccgacctggtc
cgctccgaggtggccatcggccgcgccgtcatcccggccaaccatcgtcatccggagtcg
gagccgatgatcatcggcaagcggttcgcggtgaagatcaatgcgaacatcggcaattct
gcggtgcgcagttcgatcgcggacgaggtcgagaagatggtgtgggccacccgatggggc
gccgacaccatcatggacctgtccaccggcgccgacatccacaccacccgggagtggatt
ctgcgcaactcccccgtccccgtcgggaccgtgccgatctatcaggccctcgagaaggtg
aacggcgatcccgtcgctctcacgtgggagatataccgcgacaccgtgatcgagcaggcc
gagcagggtgtcgactacatgacggtgcatgccggggtgcttctccgctacgtgccgctg
accgcccggcgggtcaccggcatcgtctcgcggggcggatcgatcatggccgcctggtgc
ctggcgcaccacgaagaatcgttcctgtacacgcacttcgacgaactgtgcgagatcttc
cgccgctacgacatcaccttctccctcggcgacggactgcgtccggggtcgatcgccgac
gccaacgacgaggcccagttcgccgaactgcgcaccctcggcgaactgacctccatcgcg
aaatcccatggcgtgcaggtgatgatcgagggcccgggacacatcccgatgcacaagatc
gtcgagaacgtgcgtctcgaagaagaactctgcgaggaggcgccgttctacacgctcggc
cccctcgccaccgacatcgcacccgcctacgaccacatcacctccgcgatcggcgcggcg
atgatcgcccaggcgggcacggccatgctctgctacgtgacacccaaggagcacctcggg
ctgcccgaccgggacgacgtgaaggtcggcgtcatcacctacaagatcgcggcccactcg
gcggatctcgcgaagggccatccgcgggcgcaggaacgtgatgacgcattgagcaaggcg
cgcttcgagttccgctgggtcgaccagttcaaccttgccctcgacccggacaccgcccgc
gagtatcacgatgagaccctgccggccgagcccgcgaagaccgcgcacttctgctcgatg
tgcggtcccaagttctgctcgatgcggatctccgccgacgtgcgcgcctacgcggaggag
aacaacctggtgaccgccgaagacatcgaccgcaagatcgccgaagggatggcggcgaag
tcggccgagttcgccgaggcgggcaaccgcgtgtacctgccgctcgaaaccggtcccgga
ggttctgcgtga
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