Gordonia alkanivorans: C5O27_02235
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Entry
C5O27_02235 CDS
T05876
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00521
Streptomycin biosynthesis
gav00523
Polyketide sugar unit biosynthesis
gav00525
Acarbose and validamycin biosynthesis
gav00541
Biosynthesis of various nucleotide sugars
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
gav01250
Biosynthesis of nucleotide sugars
Module
gav_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
C5O27_02235 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
C5O27_02235 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
C5O27_02235 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
C5O27_02235 (rfbB)
00525 Acarbose and validamycin biosynthesis
C5O27_02235 (rfbB)
Enzymes [BR:
gav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
C5O27_02235 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
NmrA
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
AZZ80058
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All DBs
Position
488781..489785
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AA seq
334 aa
AA seq
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MRVLVTGGAGFIGANFVLRTLATRPDSSIRVLDKLTYAANPETLAPVTDRVELIEGDIAD
AALVHRLVGEADLVVHFAAESHNDNSLADPSAFVHTNLVGTYTLLEAVRAHQVRYHHIST
DEVYGDLDLDDPARFTEHTAYNPSSPYSSTKAGSDLLVRAWVRSFGVAATISNCSNNYGP
YQHIEKFIPRQITNVLSGVRPKLYGDGRNVRDWIHVDDHNDAVWTIIDNGQIGETYLIGA
DGEVDNRTVVETILELLGQPKDAFDFVTDRPGHDRRYAIDSTRLRTELGWTPSYNDFRAG
LAATIDWYRDSTDWWQPVKDAVEQKYAATERVTG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgttctcgtgaccggtggtgccggtttcatcggcgccaacttcgtgctgcgcacc
ctggccacccgccccgactcctcgatccgggtcctggacaaactcacctacgccgccaac
cccgagaccctcgccccggtcaccgatcgcgtcgaactgatcgaaggcgacatcgccgac
gccgccctggtccacaggttggtcggcgaggccgatctggtggtgcacttcgccgccgaa
tcccacaacgacaactccctggccgacccctcagccttcgtacacaccaacctcgtgggc
acctacacgctgctcgaagccgtccgcgcccatcaggtgcgctaccaccacatcagcacc
gacgaggtctacggcgacctcgacctcgacgacccggcccgcttcaccgagcacaccgcc
tacaacccgtcgagcccctactcctcgaccaaggccggttccgacctgctcgtgcgtgcc
tgggtgcggtccttcggcgtcgccgccaccatctcgaactgctccaacaactacggtccg
taccagcacatcgagaagttcatcccccgccagatcaccaacgtgctctccggtgtgcgc
cccaagctctacggcgacggccgcaacgtccgcgactggatccacgtcgacgaccacaac
gacgcggtgtggaccatcatcgacaacggccagatcggcgaaacgtacctgatcggcgct
gacggcgaggtcgacaaccgcaccgtcgtcgaaaccatcctcgaactcctcggccaaccg
aaagatgcgttcgacttcgtcaccgaccgccccggccacgaccgccgctacgccatcgac
tccacccgcctgcgcaccgaactcgggtggacacccagctacaacgacttccgcgccggc
ttggccgccaccatcgactggtaccgcgacagcaccgactggtggcaacccgtcaaggac
gccgtcgaacagaaatacgccgccaccgagcgggtgaccggctga
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