Gordonia alkanivorans: C5O27_02420
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Entry
C5O27_02420 CDS
T05876
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
C5O27_02420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AZZ80090
LinkDB
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Position
525045..527372
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AA seq
775 aa
AA seq
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MQYSTFGTDLLARSLAGTDPDESPLTHLSVIPSRPASFAEWPEWVPTALLDAYADNGIER
VWTHQARAADEAFRGNHVAICTGTASGKSLSYQMPILSTLLNEKNSTALYLAPTKALGAD
QIRAVSSIIAGRPEFGHLQPCAYDGDTDPEIRQWARVHSRWIFTNPDMLHIGILSHHARW
RQFFRHLRFIVVDECHHYRGVFGSHTALVMRRLLRIARAAGANPTVIGASATVTQPAEAL
GRLIGEPAVAVTEDSSPRGERTVALWEPDFLPAVTGENGAPVRRSAGAESARLLADFVVE
GARTLCFARSRRGVELTALSARNMLSQSAPELESRIGAYRAGYLADDRRKLEKAISDGEL
LGVATTNALELGVDISGLDAVIVSGYPGTVASFWQQAGRAGRQRESGDSLVVLVARDDPL
DTFLVHHPDSLLGKPVEATVTDPANPYILGPHLLCAAAEKPLSDTEIDAWDARPVAEDLA
TEGLLRRRKSGWYVAAGVEPHAEIDIRGGIGGQVLIVDTTTSQVLGTVDTGRAMSTVHPG
AVHIHQGETYLVDELDLDDGLALAHPEDPDWTTSARETTDISITSVIESREFGPLTVAFV
EVDVTHQVVGYLRTLRTGEVLDAVELDMPEQTLHTRAVMYTLTPEVLAEAGIDDTRLPGS
LHAAEHAAIGLLPLVATCDRWDIGGVSTDLHPDTGLPTVFVYDGYMGGAGFAERGHSAFL
TWINATRDAVASCGCESGCPSCVQSPKCGNGNDPLDKDGAVTVLELLSRQYLAHA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgcagtactccacattcgggacagatctcctcgcaaggtccctcgcaggcaccgacccc
gacgagtccccactcacgcacctgtcggtaatcccgtcgcgccctgcatctttcgccgag
tggccggaatgggtgcccacagcactcctcgacgcgtacgcggacaacggaatagaacgc
gtctggacacaccaggcccgggccgccgacgaagcattccgcggtaatcatgtcgccatc
tgcacgggaaccgcatcgggtaaatcactgtcttaccagatgccaattctttcgactctg
ttgaatgaaaagaattcgacagcgttatatctcgcgccgacgaaagcgttgggcgcggac
cagatccgggcggtctcctcgatcatcgccgggcggccggagttcgggcacctgcagccc
tgcgcctacgacggcgacaccgaccccgagatccggcagtgggcgcgcgtgcactcacgg
tggatattcaccaaccccgacatgctgcacatcggcatcctctcgcatcacgcccggtgg
cgtcagttcttccggcatcttcgcttcatcgtcgtcgacgaatgccaccactaccgtggc
gtcttcggctcccacaccgcactcgtcatgcgcaggctcctccggatcgcccgtgcggcc
ggcgcgaatccgacggtgatcggtgccagcgcgacggtcacgcaacccgcggaggcattg
ggccgcttgatcggtgagcccgcggtcgcggtgaccgaggacagctcgccgcgcggtgag
cgcaccgtcgcattgtgggagccggacttcctgccggcggtgaccggggagaacggcgcg
ccggtccgacgctccgccggcgccgaatctgcacggttactcgcggatttcgtggtcgag
ggtgcgcggacactgtgtttcgcgcgcagtcggcggggcgtcgaactgacggcactgtcg
gcgcggaacatgttgtcgcagagtgcgcccgaactcgagtcgaggatcggggcctaccgt
gcgggctatctcgccgatgaccggcgcaagctcgagaaggcgatctccgacggcgagctg
ctcggtgtcgcgaccaccaacgcactcgaattgggcgtcgacatcagcggattggacgct
gtcatcgtcagcggctaccccgggacggtcgcgtcgttctggcagcaggcgggtcgggcc
ggacgccaacgggagtccggggactcgctggtggtcctggtcgcccgcgacgacccactc
gacacattcctggtgcaccatcccgactcgctcctcggcaagccggtcgaggccaccgtc
accgacccggccaacccgtacatcctcgggccgcatctgttgtgcgccgccgcagagaag
ccgctctcggacaccgagatagacgcctgggatgcgcggccggtggccgaggacctggcc
acggaaggcctgctgcgcagacggaagtcgggttggtacgtcgccgccggcgtcgaaccg
cacgccgagatcgacatccggggcgggatcggcgggcaggtgttgatcgtcgacaccacg
acctcgcaggtcctgggcaccgtcgacaccgggcgcgcgatgtcgacggtgcaccccggc
gcggtgcacatccaccagggcgagacgtacctcgtcgatgaactagacctcgacgacggc
ctggcgctcgcacatcccgaggaccccgactggaccacgtcggcacgcgagaccaccgac
atctcgatcacctccgtcatcgagagccgtgagttcggtccgctgaccgtggccttcgtc
gaggtcgacgtgacgcatcaggtagtcggttacctgcggacgctgcggaccggtgaggtg
ctcgacgccgtcgaactcgacatgcccgagcagaccctgcatacccgggcggtcatgtac
acgctcacaccggaggtgctggccgaggccggaatcgacgacacgaggctgcccggttcc
ctgcacgcggccgagcatgcggcgatcggactcctccccctcgtcgcgacgtgcgaccga
tgggacatcggcggcgtctccaccgacctccatcccgacaccggattgccgaccgttttc
gtctacgacgggtacatgggcggggcgggtttcgccgagcgcgggcactctgccttcctc
acctggatcaacgccacccgggacgccgtcgcgagctgcggatgcgagagcggctgcccg
tcgtgtgtgcagagccccaagtgtggcaacggcaatgatccgttggacaaagatggcgca
gtgaccgtcctcgaactgttgtctcggcaatacttggctcatgcatga
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