Gordonia alkanivorans: C5O27_03815
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Entry
C5O27_03815 CDS
T05876
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5O27_03815
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gav01007
]
C5O27_03815
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gav03016
]
C5O27_03815
Enzymes [BR:
gav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
C5O27_03815
Amino acid related enzymes [BR:
gav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
C5O27_03815
Transfer RNA biogenesis [BR:
gav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
C5O27_03815
Prokaryotic type
C5O27_03815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
AZZ80330
LinkDB
All DBs
Position
complement(826333..827592)
Genome browser
AA seq
419 aa
AA seq
DB search
MIDLKIVRDDPDLVRTSQRTRGEDPGLVDALLDADAARRAAIVDADTLRSEQKALGKQVG
KAQGDEKQALLAKGKELAEQVKAAVARQSEADEAAAKAHRAISNIVAPEAPAGGEDDYIV
LEHVGEPRDIENPKDHLELGESLGLLDMERGAKVSGSRFYFLTGQGAFLQLGLLNMAAQK
AAANGFTLMVPPVLVRPEVMEGTGFLGAHADEVYHLDKDDDLYLVGTSEVPLAGYHMDEI
LDLSDGPKRYAGWSTCFRREAGSYGKDTRGIIRVHQFDKVEGFIYCRPEDAEAEHQRLLG
WEKDMLAAIDVPYRVIDVAGGDLGSSASRKFDCEAWVPTQNAYRELTSTSNCTTFQARRL
SIRYRDENGKPQTAATLNGTLATTRWLVAILENHQQPDGSVKLPPELAKFVGTDVLTPR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacctgaagattgttcgtgacgacccggatctggtccgtacttcgcagcgcact
cgcggcgaggaccccggcctggtggatgccctgctcgatgccgatgcggcccgtcgtgcg
gccatcgtcgacgccgacacgttgcgctccgagcagaaggctctcggaaaacaggtcggc
aaggcgcagggcgacgagaagcaggcgctgctcgccaagggcaaggagctcgccgagcag
gtcaaggccgccgtcgcgcgtcagtccgaggccgatgaggccgccgcgaaggcccaccgc
gcgatctccaacatcgtcgcgccggaggcccccgcgggtggcgaggacgactacatcgtc
ctcgagcacgtcggagagccccgcgacatcgagaacccgaaggatcacctcgaactgggc
gagtcgctcggtctgctcgacatggagcgcggcgccaaggtgtcgggttcgcggttctac
ttcctcaccgggcagggcgccttcctgcagctcggcctgctcaacatggccgcgcagaag
gctgccgccaacggcttcacgctgatggtcccgcccgtcctggtgcgtccggaggtcatg
gagggcaccggcttcctcggcgcccacgccgacgaggtctaccacctcgacaaggacgac
gacctgtacctggtcggcacctcggaggtgccgctcgccggctaccacatggacgagatc
ctggacctgtccgacggcccgaagcggtacgccggctggtcgacctgcttccgccgggag
gccggcagctacggcaaggacacccgcggcatcatccgcgtgcaccagttcgacaaggtc
gagggcttcatctactgcagacccgaggacgccgaggccgagcaccagcgtctgctgggc
tgggagaaggacatgctggccgcgatcgacgtgccctaccgtgtcatcgacgtcgcgggt
ggcgacctcggttcgtcggcgtcgcgcaagttcgactgcgaggcttgggttcccacccag
aacgcctaccgcgagctcacgtcgacgtcgaactgcacgacgttccaggcccgccgtctc
tcgatccgctaccgcgacgagaacgggaagccgcagaccgcggcgacgctcaacggcaca
ctcgcgaccacccgctggctggtggccatcctcgagaaccaccagcagcccgacggttcg
gtgaaactgccgcccgagcttgcgaagttcgtcggcaccgacgtcctcacgcctcgttga
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