Gordonia alkanivorans: C5O27_04795
Help
Entry
C5O27_04795 CDS
T05876
Name
(GenBank) IS21 family transposase
Organism
gav
Gordonia alkanivorans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
rve
HTH_23
HTH_28
HTH_50
HTH_29
HTH_1
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AZZ80485
LinkDB
All DBs
Position
1047152..1048663
Genome browser
AA seq
503 aa
AA seq
DB search
MKSAKDRMDIISAYRELGSYRAAAEVCGTTHKTVKRVVDRFEADDQPPDRKERARNYDAV
AELVAERVERSHGRITAKRLLPVARAAGYEGSARNFRRLVAQEKTQWRRDHHRGRRPAVW
APGDYLVIDWAAIGGLHMFCAVLAFSRWRFVRFATNETSITTLGFIAEALEEIGGVPNKV
LADRMGCLKGGVVANVVVPTPTYVRFATHYGFSPDFCHGADPESKGIVENLCGYAQSDLA
QPLWTEAKIAAGRDDVQLDVHAANRAARDWCVEVNTRRHSDTLCVPADQLTIERDTLSPL
PSLRAQVGPPPVTRKVDRLSCIRYASARYSVPNRLIGTTVTLIQDGERLLIAEPASGEVV
ADHLLAAPGEVVLNDDHYGGPRTPPSRAPRPKTAVEKQFCDLGEVAEQFLVGAAAIGNTR
LGGELDDILGLVTSHGREQVLTALTRAVAFRRFKAADVRSILDAGAGTPNPRPAGTALLG
HLPTAPTRSLDAYKLGAGDKEVS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgaagtctgcgaaggaccgtatggacatcatttctgcttaccgagaactcggaagctat
cgcgccgcagccgaggtgtgcggcaccacccacaagaccgtcaagcgtgtggtcgaccgg
ttcgaggccgacgatcaaccacccgaccgcaaggaacgggcccgcaactacgatgcggtc
gccgagttggtcgctgagcgagtcgagcggtcacacggccggatcaccgccaagcgactg
ctgccggtagcacgtgccgcgggctatgagggctcggcccgcaacttccgtcgtctcgtc
gcccaggagaaaacacagtggcgccgtgatcatcatcgtggccgccgcccggcggtgtgg
gctccgggtgactacctggtcatcgattgggccgctatcggcgggctgcacatgttctgc
gcggtgttggcgttctcgcggtggcggttcgttcggttcgccaccaacgaaacatccatc
accacactcggattcatcgccgaagcgttagaagagatcggtggagtgcccaacaaggta
ctcgctgatcggatgggttgcctcaaaggtggagtcgtcgccaacgtcgtcgtacccacc
cccacgtatgtgcggtttgccacccactacgggttttccccggacttctgtcacggcgcc
gatccggaatcgaaagggatcgtggagaacctctgcgggtacgcgcagtcggatctggcg
cagccgttgtggaccgaagccaagatcgctgctggtcgtgacgacgtgcagctggatgtg
cacgcagcgaaccgggccgcgcgggactggtgtgtcgaggtcaacacccgccgtcacagc
gacacactgtgcgtgcctgctgaccaactcacgatcgaacgagacacattgagcccgttg
ccgtctctgcgggcccaggtcggtccaccgccggtcacccgtaaggtcgatcgcctctcg
tgtatccggtacgcctcggcccgctactcggtacccaaccggctcatcggcaccaccgtg
accctcatccaggacggtgagcggctcctgatcgccgaacctgcctccggtgaggtggtc
gccgatcatctgttggccgcacctggtgaggtcgtcctcaacgatgatcactacgggggg
ccacgcaccccgcccagtcgtgcaccacggcccaaaactgcggtagagaaacagttctgc
gatctcggtgaggttgctgagcagttcctggtcggtgccgcggccatcgggaacacccgc
ctgggcggtgaactcgatgacatcctcgggctcgtcacctcccacggccgcgaacaggtg
ctcaccgctctgaccagggcggtggcgttccggaggttcaaggccgccgatgtgcgctcg
atcctcgatgccggagccggcacccccaacccgcgaccggccggcacagcactgttgggt
cacctgcctaccgcgcccacccgctcgctggatgcctacaagctgggcgccggcgacaag
gaggtgtcatga
DBGET
integrated database retrieval system
