Gordonia alkanivorans: C5O27_05265
Help
Entry
C5O27_05265 CDS
T05876
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C5O27_05265 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gav03032
]
C5O27_05265 (dnaB)
Enzymes [BR:
gav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
C5O27_05265 (dnaB)
DNA replication proteins [BR:
gav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C5O27_05265 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZZ80564
LinkDB
All DBs
Position
1145694..1147946
Genome browser
AA seq
750 aa
AA seq
DB search
MAVVDDRGHGPAAGDRDTERGRGRGADDAPPTEDFGRQPPQDLAAEQSVLGGMLLSKDAV
ADVVEKIRTADFYRPAHQAVFEAILSLYSKGEPADAVTVAAELERSGELKRIGGAPYLHT
LISTVPTAANAGYYAEIVAEKAILRRLVTAGTRIVQYGYAGNDGQDVAEVVDRAQAEVYE
VTERRQAEDYLPLEELLQPTMDEIDSIASRGGISLGVPTGFADFDKLTNGLHPGQMIIVA
ARPGVGKALALDTPLPTPTGWTTMGKVGVGDELLDAHGRPTKVVAATDVMTERPCYEVEF
NDGAVLVADEQHQWAAEIDGERQVVTTAGLRAHVGCAVIRNTAPLELPRKRFAYGPYTVA
ALAGMAFDDPEISMRIDAEGPVDVMTLMADLGGRIPYEYLRGSIAQRRALLAGLLDARAT
VDDDGWITVPAATRHMTGVVADLVAGLGFNYKRSATGWLRVDADEDVFTVHHKAIRHKEL
RRKAGVRRVVAVRPVDSVPVRCVEVDNDEHLYLAGEAMVPTHNSTLAMDFLRSAAIGHGL
TAAMFSLEMSKTEIVMRLLSAEAKVKLADMRAGTMSDDDWTRLARRMGEISDAPFFIDDS
PNLTMMEIRAKARRLKQRHDLKVVAVDYMQLMTSGKKVESRQQEVSEFSRQLKLLAKELE
VPVIAISQLNRGPEQRTDKKPQVSDLRESGSLEQDADMVILLHRPDSIERDDPRAGEADI
IVGKHRNGPTATITVAHQLHLSRFVDMARG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtggctgttgtggatgaccgcgggcacggtcctgccgccggcgatcgggatacagaacga
ggtcggggtcgaggtgcggacgacgcaccgccgaccgaggacttcggtaggcaaccccca
caggatctcgctgccgagcaatccgtgctcggcggcatgttgctgtccaaagacgcggtc
gccgacgtcgtcgagaagatccggacggccgacttctatcggcccgcgcaccaggcggtg
ttcgaggcgatccttagcctctacagcaagggtgaacccgccgatgcggtcaccgtcgcc
gcagaactcgagcggtcgggtgaactcaagcgcatcggcggcgcaccgtatctgcacacc
ctgatctcgacggtgcccacagccgcgaacgccggctactacgccgagatcgtggccgag
aaggccatcctgcgccgtctggtcaccgccggtacccgcatcgtgcagtacggctatgcg
ggcaacgacggccaggacgtggccgaggtagtcgaccgcgcacaggcagaggtctacgag
gtcaccgaacgccgtcaggccgaggactaccttcccctcgaagaactgctgcagccgacg
atggacgagatcgactccatcgcctcgcgcggcggcatctcgctgggcgtgccgaccggc
ttcgcggacttcgacaagctgaccaacggtctccacccgggccagatgatcatcgtggcc
gcgcgacccggcgtcggcaaggcgctcgccctcgacaccccgctgcccacgcccaccggc
tggacgacgatgggcaaggtcggggtgggcgacgagctgctcgacgcgcacggccggccc
accaaggtggtcgccgcgaccgacgtgatgaccgaacgtccctgctacgaggtcgagttc
aacgacggcgcggtgctggtcgccgacgagcagcaccagtgggcggccgagatcgacggc
gagcgtcaggtcgtcacgacggcgggcctgcgtgcgcacgtggggtgtgcggtcatccgc
aacaccgcgccgctcgagttgccgcgcaagcgttttgcctacggcccgtacaccgtcgcg
gcgctggcggggatggcgttcgacgatcccgagatcagcatgcgcatcgacgccgagggg
cccgtcgacgtgatgacgctgatggccgacctcggcggacgcatcccctacgagtacctg
cgcggttccatcgcgcagcgtcgggcgctgctggccggcctgctcgatgcccgcgcaacc
gtcgacgacgacggctggatcactgtgcccgccgcgacccggcacatgaccggggtcgtc
gccgacctggtcgccggtctcggcttcaactacaagcgctcggccaccggctggctgcgc
gtcgacgccgacgaggacgtgttcaccgtccaccacaaggcaattcggcacaaggagctc
cgacgcaaggccggcgtccgccgcgtcgtcgcggtgcgtccggtggattcggtgccggtg
cgatgcgtcgaggtcgacaacgacgagcacctctatctcgccggcgaggcgatggtcccg
acgcacaactcgacgctggccatggacttcctgcgctcggcggctatcggacacggcctc
accgcggccatgttctcgctcgaaatgagcaagaccgagatcgtcatgcgactgctctcg
gcagaggccaaggtcaagctcgccgacatgcgtgccggcaccatgagcgacgacgactgg
acccgtctggcccgccgaatgggtgagatctccgatgcgccgttcttcatcgacgattcg
ccgaacctcacgatgatggagatccgtgccaaggcgcgtcgtctcaagcagcgccacgac
ctgaaagtcgttgcggtggactacatgcagctgatgacctcgggcaagaaggtcgagtcc
cgtcagcaagaggtctcggagttctcgcgtcagctcaagctgctggccaaggaactcgag
gtcccggtgatcgcgatcagccagctgaaccgtggtcccgagcaacgaaccgacaagaag
ccgcaggtgtcggacctccgtgagtccggttcgctggagcaggacgccgacatggtcatc
ctgctgcaccgccccgactcgatcgagcgcgacgacccgcgcgcgggtgaggccgacatc
atcgtcggcaagcaccgtaacgggccgacggccaccatcaccgtcgcgcaccagctgcat
ctcagccggttcgtcgacatggcgcggggttag
DBGET
integrated database retrieval system
