Gordonia alkanivorans: C5O27_06100
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Entry
C5O27_06100 CDS
T05876
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00071
Fatty acid degradation
gav00280
Valine, leucine and isoleucine degradation
gav00310
Lysine degradation
gav00362
Benzoate degradation
gav00380
Tryptophan metabolism
gav00410
beta-Alanine metabolism
gav00640
Propanoate metabolism
gav00650
Butanoate metabolism
gav00907
Pinene, camphor and geraniol degradation
gav00930
Caprolactam degradation
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
gav01120
Microbial metabolism in diverse environments
gav01200
Carbon metabolism
gav01212
Fatty acid metabolism
Module
gav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
C5O27_06100
00650 Butanoate metabolism
C5O27_06100
09103 Lipid metabolism
00071 Fatty acid degradation
C5O27_06100
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C5O27_06100
00310 Lysine degradation
C5O27_06100
00380 Tryptophan metabolism
C5O27_06100
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C5O27_06100
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
C5O27_06100
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
C5O27_06100
00930 Caprolactam degradation
C5O27_06100
Enzymes [BR:
gav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
C5O27_06100
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
C5O27_06100
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
C5O27_06100
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
UDPG_MGDP_dh_N
2-Hacid_dh_C
NAD_Gly3P_dh_N
NAD_binding_8
GIDA
Shikimate_DH
ThiF
Motif
Other DBs
NCBI-ProteinID:
AZZ80699
LinkDB
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Position
1326035..1328236
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AA seq
733 aa
AA seq
DB search
MSDNMINWEKDADGVVILTMDDPNQGANTMNALYQESMAATVDRLEAEKDDITGVVLTSA
KKTFFAGGDLKDMTSDRSNVSKAEIATQITETTNAMKKVLRRLETLGKPVVAAINGAALG
GGLEIALHTHYRIAADVKGVQIGLPEATLGLLPGGGGVVRTVRLLGIQNALMGVLLQGQR
FNPTKAKETGLVNEVVGSIEELIPAAKAWIKENPEAQQPFDVKGYKIPGGAPTNPAFAAN
LPALPALLRKQIKGANMPAPRAILAAAVEGAYVDVDTADIIETRYFVSLVTGQVAQNMIK
AFFFDLQHINGGGSRPDGYDKYTAKKVGVIGAGMMGAAIAYVSAKAGIEVVLKDIDLEAA
KRGKGYSEKLEAKALAKGKTTQEKSDALLARIHPTVDPQDFKGVDLVIEAAFESVEVKHK
VFQEIEDIVEPDAVLGSNTSTLPITILAEGVKRSEDFIGIHFFSPVDKMPLVEIIKGEKT
SDAVLAKVIDYTLQIRKTPIVVNDSRGFFTSRVIGTFVNEAIAAVGEGVEPAFIEHAGTQ
AGYPAAPLQLMDELTLTLPQKIRKETEAALQAEGKDVPQHGSNAVVDWMVENGRTAKKDG
KGFYDYDENGKRTQLWPGLREQFNSGSKEIPLEDMKERMLFAESLETVKCFDEGVLTSVE
DANIGSIFGIGFPAWTGGVIQYINGYEGGVPGFVARAKELAAKYGKHFEPPASLVEKAEQ
GVTKLTNENLAAK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaacatgatcaactgggagaaggacgccgacggcgtcgtcatcctcaccatg
gacgaccccaaccagggcgccaacacgatgaacgcgctgtaccaggagtcgatggcagcg
accgtcgaccgcctggaggcggagaaggacgacatcaccggtgtcgtcctgacctcggcg
aagaagaccttcttcgccggcggcgacctcaaggacatgacgagcgaccgctcgaacgtc
tccaaggccgagatcgccacccagatcaccgagaccaccaacgccatgaagaaggtgctg
cgtcgtctcgagaccctgggcaagcccgtcgtcgcggccatcaacggtgctgcactcggt
ggcggcctggagatcgcgctgcacacccactaccgcatcgccgcggacgtcaagggtgtc
cagatcggtctgcccgaggccaccctcggcctgctccccggcggcggcggcgtcgtccgt
accgtccgcctgctcggtatccagaacgccctcatgggtgtcctgctccagggccagcgc
ttcaacccgaccaaggccaaggagaccggcctggtcaacgaggtcgtcggttccatcgag
gaactgatccccgccgccaaggcatggatcaaggagaaccccgaagcccagcagccgttc
gacgtcaagggttacaagatcccgggcggtgcccccaccaacccggccttcgccgcgaac
ctcccggctctgccggccctgctgcgcaagcagatcaagggtgccaacatgccggctccg
cgcgccatcctggccgcagccgtcgagggtgcctacgtcgacgtcgacaccgccgacatc
atcgagacccgctacttcgtctcgctggtcaccggccaggtcgcgcagaacatgatcaag
gcgttcttcttcgacctgcagcacatcaacggtggcggctcgcgccccgatggctacgac
aagtacaccgccaagaaggtcggcgtcatcggcgccggcatgatgggcgcggccatcgcg
tacgtctcggccaaggccggcatcgaggtcgtcctcaaggacatcgacctcgaagctgcc
aagcgcggcaagggttactcggagaagctcgaggcgaaggctctcgccaagggcaagacc
acgcaggagaagagcgacgcgctcctcgcccgcatccacccgaccgtcgacccgcaggac
ttcaagggcgtcgacctcgtcatcgaggccgcgttcgagtcggtcgaggtcaagcacaag
gtgttccaggagatcgaggacatcgtcgagcccgacgccgtcttgggttccaacacctcg
accctgccgatcaccatcctcgccgagggtgtgaagcggtccgaggacttcatcggtatc
cacttcttctcgccggtcgacaagatgccgctggtcgagatcatcaagggtgagaagacc
tcggatgccgtgctggccaaggtcattgactacaccctgcagatccgcaagactccgatc
gtcgtcaacgacagccgtggcttcttcaccagccgcgtcatcggcaccttcgtcaacgag
gccatcgcggccgtcggcgagggcgtcgaaccggcgttcatcgagcacgcgggcacccag
gccggttacccggccgcgccgctgcagctcatggacgagctgaccctgaccctgccgcag
aagatccgcaaggagaccgaggcagcgctccaggccgagggcaaggacgtcccgcagcac
ggctcgaacgccgtcgtcgactggatggtcgagaacggccgcaccgccaagaaggacggc
aagggcttctacgactacgacgagaacggcaagcgcacccagctctggccgggcctgcgt
gagcagttcaactcgggctccaaggagatcccgctcgaggacatgaaggagcgtatgctc
ttcgccgagtctctcgagaccgtcaagtgcttcgacgagggtgtgctcacctccgtcgag
gacgccaacatcggctcgatcttcggcatcggcttcccggcctggaccggtggtgtcatc
cagtacatcaacggttacgagggtggcgtacccggcttcgtcgcgcgtgccaaggaactc
gccgccaagtacggcaagcacttcgagccgccggcctcgctcgtcgagaaggctgagcag
ggtgtcaccaagctgaccaacgagaacctcgctgccaagtaa
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