Gordonia alkanivorans: C5O27_08030
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Entry
C5O27_08030 CDS
T05876
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5O27_08030 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gav01007
]
C5O27_08030 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gav03016
]
C5O27_08030 (lysS)
Enzymes [BR:
gav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C5O27_08030 (lysS)
Amino acid related enzymes [BR:
gav01007
]
Aminoacyl-tRNA synthetase
Class II (A)
C5O27_08030 (lysS)
Transfer RNA biogenesis [BR:
gav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C5O27_08030 (lysS)
Prokaryotic type
Other AARSs
C5O27_08030 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AZZ81013
LinkDB
All DBs
Position
1752529..1754112
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AA seq
527 aa
AA seq
DB search
MTGPDSVRGVSDSPTSTASTAAETTTDADDQTPEQLRIRREKRERILSEGREAYPVSIPR
THSLGEIRAAYPDLEAGTETGQHVGVSGRVIFLRNKGKLCFATLQEGDGTQLQAMISFNG
VGEDALGRWKSDVDLGDIVFISGEVISSRTGELSVMADGWQMASKSLRPLPVAHKDMNEE
TRVRQRYVDLIMRPEARETARTRIKVMAELRAALGRRGFLEVETPMLQTLHGGAAARPFV
THSNAFDMDLYLRIAPELFLKRCVVGGIERVFEINRNFRNEGADSTHSPEFAMLETYQAY
GTYDDSAKMIRELVQEVSQAALGTQTPTMPDGSTYDLSGEWTSLEMYPSLSEALGEEIVP
AGNPGETTVEQLLAIAKRVGLEVPKDKGYGHGKLVEELWEHMVGEKLSEPVFIRDFPVET
SPLVRSHRSVKGVVEKWDLYVRGFELATGYSELVDPVIQRERFVDQARLAAAGDDEAMVL
DEEFLAAMEYGMPPTTGTGMGIDRLLMALTGLGIRETILFPLVKPRT
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggccccgatagtgtgcgtggggtgagtgacagcccgaccagcaccgcctccacc
gcggccgagacgaccacggacgccgacgaccagactcccgaacagctgcgaatccgacgc
gagaagcgcgagcgcatcctgtccgagggtcgcgaggcgtatccggtctcgattccgcgc
acccactctctcggcgagatccgcgccgcctaccccgatctcgaggccggcaccgagacc
ggtcagcacgtcggtgtctccgggcgcgtcatcttcctgcggaacaagggcaagctgtgc
ttcgcaaccctgcaggagggcgacggcacgcagctccaggcgatgatcagcttcaacggc
gtcggcgaagatgcgctgggccgctggaagtccgatgtcgacctcggcgacatcgtcttc
atctccggtgaggtgatcagctcccgtaccggtgagctgtcggtgatggccgacggctgg
cagatggcgtcgaagtcgttgcggccgttgcccgttgcccacaaggacatgaacgaggaa
acccgggtgcgccagcgctacgtcgatctcatcatgcggccggaggcccgcgaaaccgcc
cgcacccgcatcaaggtgatggccgaactccgtgccgcactgggccgtcggggattcctc
gaggtcgagaccccgatgctgcagacgctgcacggcggtgccgcggctcgcccgttcgtc
acgcactccaacgccttcgacatggacctgtacctgcgcatcgcgccggagttgtttctc
aagcgctgcgtggtcggcggcatcgagcgtgtcttcgagatcaaccgcaacttccgcaac
gagggcgccgactccactcactcgcccgagttcgcgatgctggagacctatcaggcctac
ggcacctacgacgactccgcgaagatgatccgcgaactcgtgcaagaggtttcgcaggcc
gcgctgggtacccagaccccgaccatgcccgacggttcgacctacgacctctccggcgag
tggacctccctcgagatgtacccgtcgctgtcggaggcgctcggcgaggagatcgtgccc
gccggcaatccgggggagaccaccgtcgagcagctgctggcgatcgccaagcgcgtcggc
ctggaggttcccaaggacaagggttacggccacggcaagctcgtcgaggagctgtgggag
cacatggtcggcgagaagctgagcgagccggtgttcatccgcgacttcccggtcgagacc
tcgccgctggtgcgctcccaccggtcggtcaagggtgtggtcgagaagtgggacctctac
gtccgcggcttcgagctggccaccggctactccgagctcgtcgaccccgtcatccagcgc
gagcgcttcgtcgaccaggcccgcctggccgccgccggcgacgacgaggcgatggtcctc
gacgaggagttcctcgccgcgatggaatacggaatgcccccgaccaccggcaccggcatg
ggcatcgaccgcctgctgatggccctcaccggcctcggcatccgcgagaccatcctcttc
ccgctggtgaagccccgcacctag
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