Gordonia alkanivorans: C5O27_09500
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Entry
C5O27_09500 CDS
T05876
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gav03016
]
C5O27_09500
Enzymes [BR:
gav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
C5O27_09500
Transfer RNA biogenesis [BR:
gav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
C5O27_09500
Prokaryotic type
C5O27_09500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AZZ83659
LinkDB
All DBs
Position
2133237..2134112
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AA seq
291 aa
AA seq
DB search
MTEPVGPDSGAGGFCRLRFDLGYDGTDFAGWARQIGQRSVCEELETRLSTILRVPVRLTV
AGRTDAGVHATGQVAHAVIPASALETRSIGGDPSTLIGRLAKMCPDDIRVKEVRVVPDAF
DARFSALRRHYRYRLDDSRWGPEPVVARTTATWRRPLDVDAMNAASTELLGLNDFAAFCR
RREGATTIRDLQRFSWTRDADGVLVGEVSADAFCWSMVRSLVGAVASVGDGRRSVDWCSA
LLAEKARSSQVPVAEARGLCLVGVDYPADDELAARNTVTRDVRGATGCCGG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgaacccgtcggcccggattccggtgccggcgggttctgtcgtctgcgcttcgac
ctcggctacgacggcaccgatttcgccgggtgggcacggcagatcgggcagcgcagtgta
tgcgaggaactcgagaccaggttgtcgacgatcctgcgggtgccggtccggttgacggtg
gccgggcggaccgacgccggtgtgcatgcgacggggcaggtcgctcatgccgtcatcccg
gcctcggcgctggagacccggtcgatcggcggcgacccgtcgaccctcatcggtcgactg
gcgaagatgtgcccggatgacatccgggtgaaagaggtccgggtggtcccggacgcgttc
gatgcgcgtttctccgcgctacggcgccactaccgctatcggctcgacgactcgcggtgg
gggccggaacccgtggtcgcgcggacgactgcgacctggcgccgcccgctcgacgtcgac
gcgatgaacgccgcgtcgacggaactcttggggctgaacgacttcgccgccttctgtcgg
cggcgggagggtgcgacgacgatccgggacctgcagcgcttctcgtggacgcgtgacgcg
gacggcgtgctcgtcggtgaggtcagcgcggatgcgttctgctggtctatggtgcggtcg
ctggtgggtgccgtcgccagcgtcggggacggccggcggagcgtcgactggtgcagtgcg
ttgctcgcggagaaggcgcgcagttcgcaggtgccggtggccgaggccaggggactgtgc
ctggtcggcgtggactatcccgccgacgacgaactcgccgcccgcaacacggtgacccgc
gacgtgcgcggagccaccggttgctgcggaggctag
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