Gordonia alkanivorans: C5O27_09720
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Entry
C5O27_09720 CDS
T05876
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gav03000
]
C5O27_09720
Transcription factors [BR:
gav03000
]
Prokaryotic type
Helix-turn-helix
Other families
C5O27_09720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
GAF
HTH_50
HTH_22
AAA_16
AAA_22
HTH_29
HTH_7
HTH_28
HTH_30
HTH_23
HTH_11
ABC_tran
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AZZ81307
LinkDB
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Position
complement(2179125..2180918)
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AA seq
597 aa
AA seq
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MKPKPTDQSREPVAHVARARERFLSDDGVVDDRMSGAVRDAISTSWRRSRSFNVQTDRLE
LPFVREPNTDSPLMTAARPVLDQLAADLSAEPVSIILTSPDGVVLSRAAGCGELLGQLDA
VSLAPGYSYSEEHAGTNGIGTALETRQATLVTGAEHYAGCLARLSCAGVPIRNPFSGGLV
GALDLTGWVQEGGSLLLSLAKSATVQIEQQMLANASERESRLLSAYLATCRRAPQMMVLA
IAADVVLMNRRLRQSIDPQDQVSMLEHAVDQCLEVAAGRRVNTLPSGRSVRLAPVTEFSD
AEDGVAIFHVHLMDSATAAPPQRRSSKPSVLPGIVGRSSSWRQACDRIVQHVGDGHWIAV
SGERGSGRSAVLRAAAGRHRRGTIRVYAAEDFQDADTLDSFAAELDTDAFAIILRDVDEL
PDDVLFDVAEVMQGREHAGWLGMTLSSSDSTPALGATLLPFFSHTIEVPPLRHRIEDLQV
LVPTILLQLTRGRELAVAPDAMRQLSKYTWPGNVAELRQALRDVVIHHRSGTITAQHLPP
TYRAQSRHTLTRIEALERDAIVRSLEENGRNKVAAANALGISRATIYRKIKEFGIDV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcccaagccaacagaccagtctcgtgaacccgtcgcccacgtggctcgggcgcgg
gagagattcctcagcgacgacggcgtcgtcgacgatcgcatgtccggcgccgtccgcgac
gcgatctccacctcgtggcgtcgctcgcgctcgttcaacgtgcagaccgaccgcttggaa
ctcccgttcgtgcgcgagccgaacaccgacagtccgctgatgaccgcggcccggccggtg
ctcgaccagctcgccgcggacctgtcggccgagcccgtgagcatcatcctcacctcgccg
gacggcgtggtgctgtcccgcgccgccggctgcggcgagctcctcggccagctcgacgcc
gtgtcactcgcccccggctacagctacagcgaagagcacgccggcaccaacgggatcggc
accgccctcgagacccgacaggccaccctcgtcaccggtgccgagcactacgcggggtgc
ctcgcccggctcagctgcgccggcgtgccaatccgaaatcccttctccggcggactcgtc
ggcgccctcgacctcaccgggtgggtccaggaaggcggctccctgctgctgtcgctggcc
aagtcggcgaccgttcagatcgaacagcagatgctggcgaacgccagcgaacgcgaatcc
cggcttctatcggcctatctcgcaacctgccggcgcgcgccccagatgatggtcctcgcc
atcgccgccgacgtcgtcctgatgaaccggcgcctccggcagagcatcgacccgcaggat
caggtgtcgatgctcgagcacgccgtcgatcagtgcctcgaggtcgccgcggggcgtcgg
gtgaacacgctgcccagcgggcgttcggtacggctggcaccggtcacggagttctccgac
gccgaggacggtgtcgcgatcttccatgtgcacctgatggattcggccactgccgcccca
ccacagcgtcgatcgtcgaagccctcggtgttgcccgggatcgtcggacgcagctcgtcg
tggcgtcaggcttgcgaccgcatcgtccagcacgtcggggacggccactggatcgcggtc
tcgggcgaacggggttcgggccggtcggcggttctccgcgcggcggcgggacggcatcgg
cgcgggacgatccgcgtgtacgccgccgaggacttccaggacgccgacacgctcgacagc
ttcgccgccgagctcgacacggacgctttcgcgatcatcctgcgcgacgtcgacgagttg
cccgacgacgtcctgttcgacgtcgccgaggtgatgcagggacgcgagcacgcgggctgg
ctgggcatgaccctcagctccagcgattcgacacccgccctgggtgccaccctgctgccg
ttcttctcgcacaccatcgaggtgccgccgctgcgtcatcgcatcgaggatctacaggtt
ctggtgccgaccatcctcctacaactgacccgcggacgggaactcgccgtcgcgccggac
gccatgcggcagctgagcaagtacacctggccggggaacgtcgcagaactccgccaggcg
ctgcgggacgtggtcatccaccatcggtcggggacgatcactgcgcaacacctgccgccg
acctatcgcgcccagagccggcacaccctcacccgcatcgaggcactcgaacgggatgcg
atcgtgcggagcctggaggagaacggtcggaacaaggtcgcggcggccaacgccctcggc
atctcccgcgcgacgatctatcgcaagatcaaggagttcggcatcgacgtgtag
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