Gordonia alkanivorans: C5O27_10025
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Entry
C5O27_10025 CDS
T05876
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gav
Gordonia alkanivorans
Pathway
gav03420
Nucleotide excision repair
gav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C5O27_10025
03430 Mismatch repair
C5O27_10025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gav03400
]
C5O27_10025
Enzymes [BR:
gav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C5O27_10025
DNA repair and recombination proteins [BR:
gav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C5O27_10025
MMR (mismatch excision repair)
Other MMR factors
C5O27_10025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
Viral_helicase1
AAA_30
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AZZ83666
LinkDB
All DBs
Position
2247941..2250073
Genome browser
AA seq
710 aa
AA seq
DB search
MESVRHPTFPANPDARSRDAGAVEGLDPEQSAAVLAPRGPVCVLAGAGTGKTRTITRRIA
HLVDTGQVNPGQVLAVTFTARAAGEMRTRLRSLGVGGATGNVAAQTFHAAAMRQLRYFWP
RAFGDARWELLDNKFPLISRAARRAGLDTATDTLRDLSSEIEWAKATLISPENYVEAVGR
LGRESPAPPQKVAAVYGHYEDSKVSPDGDRLLDFDDMLIYMTQILTIEPGAADEFRSRYR
CFVVDEYQDVTPVQQGLLDAWLGERDDLTVVGDANQTIYTFTGASPNYLLDFSRRFPEAT
VVRLERDYRSTPEVVDLANRVIGAARGRIAGTRLRLIGQRPSGPQPQFAEYDDEPAAATS
IAIEIKHLIKAGVAPSEIAILYRVNAQSENYEQALTEAGIPYQVRGGEAFFARTEVRQAM
RQIATVANREVKPGVTTIDVVRAVLGELGLTEEEPSGAQARARWESLKALVQLTEDMVAE
NPDLTLPQLSAELTTRSEARHPPTVQGVTLSSLHAAKGLEWDAVFLVGLTDGSLPISQAI
KGSWEDVEEERRLFYVGVTRAREHLHLSWALARNEGGRARRRSRFLTDLIPDDSPASKIA
KERTPRKGPTCRVCGSRLMDSTATLLGRCAGCPSDLDENLLVALKEWRRARAQAKKVPPF
VVFSDKTLTAIAEQRPTDTAALVSISGIGAQKLDEYGEDLLDLVKTAGQK
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccgtgcgccacccgaccttccccgcgaaccccgatgcccgctcccgcgatgcc
ggcgcggtcgagggactcgacccggagcagtccgcggccgtcctcgcaccgcgcggcccg
gtatgtgtgctggccggcgcgggtacgggcaagacgcgcaccatcacgcgccgcatcgcc
cacctcgtcgacaccgggcaggtgaatcccggccaggtcctcgcggtcacgttcaccgcc
cgcgcggcgggtgagatgcggacccggttgcggagcctcggcgtcggcggcgccaccggc
aacgtcgccgcccagaccttccatgccgcggcgatgcggcagctgcgctacttctggccg
cgcgccttcggtgatgcccggtgggagctgctcgacaacaagttcccgctcatctcgcgc
gccgcgcgccgcgccggactcgacaccgcgaccgacaccctgcgcgacctgtcgtcggag
atcgaatgggccaaggccacgctgatctcgccggagaactacgtcgaggcggtcgggcgc
ctcggacgcgagtcacccgcgcccccgcagaaggtcgccgcggtgtacggccattacgag
gactccaaggtctcgccggacggcgatcgccttctcgacttcgacgacatgctcatctac
atgacgcagatcctgaccatcgaacccggcgcggccgacgagttccgctcgcgttaccgg
tgtttcgtcgtcgacgagtaccaggacgtgacgcccgtccagcagggtcttctggacgcc
tggctcggcgagcgcgacgacctgacggtcgtcggcgacgccaatcagacgatctacacg
ttcaccggcgcgtccccgaactacctgctcgacttcagccgccgcttcccggaggcgacg
gtcgtccggctggaacgcgactaccggtccacgcccgaagtcgtcgacctcgccaatcgc
gtgatcggcgccgcgcgcgggcgcatcgccggcacccggctccgtctcatcggccagcgc
ccgtccggtccgcagccgcagttcgccgagtacgacgacgagccggccgccgccacgtcg
atcgcgatcgagatcaagcacctcatcaaggcgggtgtcgcgccgtcggagatcgcgatc
ctctaccgcgtcaacgcccagtcggagaactacgagcaggcgctgaccgaggccggcatc
ccgtatcaggtgcgcggtggcgaggcgttcttcgcgcggaccgaggtgcgtcaggcgatg
cggcagatcgcgacggtggccaaccgcgaggtgaagcccggtgtgacgacgatcgacgtc
gtgcgcgcggtcctcggcgaactcgggctcaccgaggaggaaccgtcgggtgcgcaggcg
cgcgcccggtgggagtcgctgaaggcgctggtgcagctcaccgaggacatggtcgccgag
aaccccgatctcacgttgccgcagctgtccgcagaactcacgacccggtccgaggctcgc
cacccgccgacggtccagggcgtcaccctgtcgtcgctgcacgcggccaagggactcgaa
tgggatgcggtcttcctggtggggctgaccgacggatcgttgccgatcagtcaggccatc
aagggttcgtgggaggacgtcgaggaggagcgccgactgttctacgtgggcgtgacgcgt
gcccgcgagcacctacatctgtcgtgggccctcgcccgcaacgagggtggccgcgcccgt
cgtcggtcccgattcctgaccgatctcatccccgacgattcgccggcctcgaagatcgcg
aaagaacgtacgccccgcaagggacccacatgccgcgtctgcggctcgcggttgatggat
tcgacggcgacgctgctcggtcggtgcgcggggtgtccgtcggacctggacgagaacctc
ctggtcgcactcaaggagtggcgccgggcccgcgcccaggcgaaaaaggtcccgcccttc
gtggtcttctccgacaagacgctcaccgcgatcgccgaacaacggcccacggacaccgct
gcgctggtgtcgatctcggggatcggggcgcagaaactcgacgagtacggcgaggatctc
ctcgatctcgtcaaaaccgcaggtcaaaaatag
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