Gordonia alkanivorans: C5O27_12210
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Entry
C5O27_12210 CDS
T05876
Symbol
cobT
Name
(GenBank) nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
KO
K00768
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:
2.4.2.21
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00860
Porphyrin metabolism
gav01100
Metabolic pathways
gav01240
Biosynthesis of cofactors
Module
gav_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
C5O27_12210 (cobT)
Enzymes [BR:
gav01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.21 nicotinate-nucleotide---dimethylbenzimidazole phosphoribosyltransferase
C5O27_12210 (cobT)
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Motif
Pfam:
DBI_PRT
CobU
Lipase_GDSL_2
DUF3275
Motif
Other DBs
NCBI-ProteinID:
AZZ81740
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Position
complement(2689538..2691316)
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AA seq
592 aa
AA seq
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MADRATRTLVLGGVRSGKSAHGESLLRAHQQIRYLATGPVTTSDAEWTARVNTHRQRRDA
RYTTIETTDLAEALRAAPDIPALVDDLGSWLTARIDAVDGWESGSGIDLDADITELCDSL
RAMNADVVLISSEVGLSLVPPTPAGRLFQDLLGTLNSAVAQACDRVSLVVAGRVLDLPAD
PSAEDHTGATVSAAPAPAVAPVPTAPVATPAPVTPGPVDEPTPVTTAAELPDPTDAEVFG
PITPPSEAVAFEARERQKTLTKPPGSLGRLEEIGVWISACQGQCPPAPITSPSVAVFAGD
HGVARGGVSAFPPEVTAQMVANISSGGAAVNVMAARVGATVMVVDMSVDADTSPHLSTFK
VRRSSEDLRTTDSITLAEARAALAAGRAIADRLIDSGSDLLIAGEMGIGNTTPATVLIGA
LTRREPVEIVGRGTGVDDHGWMRKTAAIRDGMRRARKVVHDPLALLAAVGGADLTATAGF
LAQAALRRTPVILDGVVITAAAMVANELAPGAMRWWIAGHRSVEPAHQIALDHLDLEPVL
DLSMRLGEGSGAVLALPVVQSAADILISMATFAEAGVTDRDDAAVPEAAESS
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcgcgctacgcgcacactcgtcctgggcggtgtgcgttcgggtaaatccgcc
cacggcgagtcgctgctccgcgcgcatcagcagatccggtacctggccaccggtccggtg
accacgtccgacgccgagtggacggcgcgggtcaacacgcacaggcagcgtcgggacgcc
cgctacacgacaatcgagaccaccgacctcgccgaggccctccgcgcggcacccgacatc
ccggccctggtcgacgacctcggcagctggctcaccgcgcggatcgacgccgtcgacggc
tgggaatcgggttcggggatcgacctcgacgccgacatcaccgaactctgcgactcgctg
cgggcgatgaacgccgacgtggtgctgatcagttccgaggtcgggctctcgctggttccc
ccgacgccggcgggccggttgttccaggacctgctgggcactctgaactcggcggtggca
caggcgtgcgaccgggtgtctctcgtggtcgccggccgcgtactcgacctgcccgccgac
ccgtctgccgaagaccacaccggtgcaacggtttccgcggcacccgcacccgccgtcgcg
ccggtcccgacggcaccggtggcgactcccgccccggtcacgcccggacctgtcgacgag
cccacacccgtcacgaccgccgccgagctccccgatcccaccgacgccgaggtcttcgga
ccgatcacgcccccgagcgaggcggtcgccttcgaggcccgcgagcgccagaagacgctg
accaagccgccgggttcgctgggacgcctcgaggagatcggggtctggatctccgcgtgc
caggggcagtgcccgcccgcgccgatcacctcgccgagcgtcgccgtcttcgccggcgat
cacggcgtcgcgcgcggcggtgtgtcggcgttcccgcccgaggtcaccgcgcagatggtc
gccaacatctcctcgggtggcgccgcggtcaacgtgatggccgctcgtgtcggagccacg
gtgatggtcgtggacatgtccgtcgacgccgacacatctccccatctctcgacgttcaaa
gtccgccgcagcagcgaggatctacgcaccaccgactcgatcaccctcgccgaggcccgc
gcggcgctggccgccggccgggcgatcgccgatcggctcatcgactccggcagcgacctg
ctgatcgccggcgagatgggcatcggcaacaccaccccggcaaccgtcctgatcggtgcg
ctcacgcgacgcgagccggtcgagatcgtcgggcgcggaacaggtgtcgacgaccacggc
tggatgcggaagaccgccgcgatccgcgacggcatgcgccgggcccgcaaggtcgtgcac
gacccgctcgccctcctcgccgccgtcggtggcgccgacctgacggccaccgcgggtttc
ctcgcgcaggccgcgctccggcgcacgcccgtcatcctcgacggcgtcgtgatcaccgcg
gccgcgatggtcgccaacgaactcgcacccggcgccatgcgctggtggatcgccgggcac
cgctcggtggagcccgcgcatcagatcgcgctcgatcacctcgatctcgaaccggtcctc
gacctgtcgatgcgcctcggcgagggcagtggcgcggtcctggcgctgccggtcgtgcag
tcggccgccgacatcctcatctcgatggcgaccttcgccgaggccggggtgaccgaccgc
gacgacgcggccgttcccgaagccgccgagtcgtcctga
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