Gordonia alkanivorans: C5O27_12465
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Entry
C5O27_12465 CDS
T05876
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00470
D-Amino acid metabolism
gav00550
Peptidoglycan biosynthesis
gav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C5O27_12465 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C5O27_12465 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
C5O27_12465 (murD)
Enzymes [BR:
gav01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
C5O27_12465 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
gav01011
]
Precursor biosynthesis
Amino acid ligase
C5O27_12465 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Thi4
Motif
Other DBs
NCBI-ProteinID:
AZZ81785
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Position
2744888..2746474
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AA seq
528 aa
AA seq
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MADPLAESPASAGDSLGLTGETVVIGGAGTAGMSAARYLITRDVRILLADDRFAARDADA
AGREAAIAAVPGVADLIAQGAEAVAISDLLADPSWTGDTAVVIVSPGFAPTHDLVAQAAA
GGVPVWGEVELAWRVDAAGLLGEPRTWLVVTGTNGKTTTTSMLADIVERSGRAGAACGNI
GLPVLDAMRATPRVDVLCAELSSFQLHWAPSVTPAAGVVLNVAEDHLDWHGTFDAYALAK
AGALRGDIAVVGLDDAVASGLPGAGRRVGFTLNPPQDGQLGVENGQLVDRAFGAGRLLSA
GVVHPAGPSGVSDALAAAALALSIGVERDAVEAALTDFRPAAHRGEVVATRDGIRFVDDS
KATNPHAAQAAVAAYDRVVLIAGGLLKGASMDGMLTAVGHRLAGVVAIGRDRELVVEAIA
RHAPEVPTVTVFTGDDGTVNVQRQGQTAPVLSSIPNSSTRASGSDPAVAVMDRAVAEAWE
LAAASDPKPDAVLLAPAAASLDMFAGYGRRGDAFAHAAQDIAGTSTSR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgctcgccgagagccccgcgtctgccggcgattcgctggggttgaccggg
gagaccgtggtgatcggcggtgcgggcaccgccgggatgtcggcggcgcggtatctcatc
acccgcgacgtccgcatcctgctcgccgacgaccggttcgctgcacgcgatgccgacgcc
gccggccgggaggcggcgatcgccgccgtccccggggtcgcggacctgatcgcgcagggc
gcggaggcggtcgcgatctccgatctgctcgccgacccgtcgtggaccggcgacaccgcg
gtcgtgatcgtctcgcccggattcgcacccacccacgacctcgtcgcgcaggccgcggcg
ggcggtgtgccggtgtggggtgaggtcgagttggcctggcgggtcgacgccgctggtctg
ctcggtgagccgcgcacctggctggtcgtcaccggcaccaacggcaagaccacgaccacc
tcgatgctcgccgacatcgtcgagcgctccggccgtgccggcgcggcctgcggcaacatc
ggtctgccggtcctcgacgccatgcgcgcgacgccccgcgtcgacgtgctgtgcgccgag
ttgtcgtcgttccagctgcactgggcgccgtcggtcaccccggcggccggggtggtgctc
aacgtcgccgaggaccatctcgactggcacggcaccttcgacgcctatgcgctggccaag
gcgggtgcgctgcgcggcgacatcgcggtcgtcggcctcgacgacgcggtcgcgtcgggt
ctgccgggcgcgggacgccgggtcggcttcacgctgaacccgccgcaggacggtcagctc
ggcgtcgagaacgggcaactcgtcgaccgcgccttcggtgcgggtcgtctgctgtccgcc
ggcgtcgtgcatccggccggtccgtcgggtgtctccgacgctctcgccgccgccgcactc
gcactgtcgatcggagtcgagcgcgacgccgtcgaggccgcgctcaccgatttccggccc
gccgcccaccgcggcgaggtcgtggcgacgcgcgacggcatccgcttcgtcgatgactcc
aaggccaccaacccgcatgccgcccaggccgcggtcgccgcgtacgaccgtgtggtgctg
atagcgggcggcctgctcaagggtgcgtcgatggacgggatgctcaccgcggtcggccat
cggctcgccggagtggtcgccatcggccgggatcgggaactggtcgtcgaagcgatcgcg
cgacacgccccagaagtcccaacagtcacagtattcacaggggacgatggcacggtgaac
gtgcaacgccagggtcagaccgcacccgtcctctcgtcgatcccgaactcgtcgactcga
gcctcgggatcagaccccgccgtcgccgtgatggaccgggcggtcgccgaggcgtgggag
ctcgccgcggcgagcgacccgaagcccgacgcggtgctcctcgcacccgccgcggcgtcg
ctggacatgttcgccggttacggccggcgcggtgacgcgttcgcgcacgccgcacaggac
atcgccggcacctccacctcgcggtga
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