Gordonia alkanivorans: C5O27_12660
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Entry
C5O27_12660 CDS
T05876
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00500
Starch and sucrose metabolism
gav01100
Metabolic pathways
gav01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
C5O27_12660 (glgX)
Enzymes [BR:
gav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
C5O27_12660 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AZZ81820
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Position
complement(2793000..2795441)
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AA seq
813 aa
AA seq
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MTSSPKVGSTASPTAGEQPDPGTSDTPPLPMPDDPVQADALVEPEPAPIPVWPGTPYPLG
ATYDGAGTNFSLFSEVAEAVELCLIDRDGKERRIRLEEVDGYCWHCYLPNVVPGQFYGFR
VHGPYDPSRGLRCDPSKLLLDPYGKAFHGDFDGDASLFSYPLPTPDDAEGPPEDPTEEPV
ADADASEVDAAEDEAAPEATDGEVAEATDDAETVELEPLPENPPAPEHPMPGLDSLGHTM
VSVVINPYFDWQNDRSPNRPYHQTVIYEAHVKGMTATHPGVPENLRGTYAGLCHPVIIDH
LKSLGVTAIELMPVHQFMQDFTLRDQGLRNYWGYNTFGFLAPHIEYSSTPDQPASAVTEF
KAMVREFHNAGIEVILDVVYNHTAEGNHLGPTVCFRGIDNAAYYRLVDGEPEMYMDYTGT
GNSLNGRHPHTLQLIMDSLRYWILEMHVDGFRFDLASTLARELHDVDRLSAFFDLVQQDP
VVSQVKLIAEPWDIGEGGYQVGNFPPLWTEWNGKYRDTVRDYWRGEPSTLGEFASRLTGS
SDLYAATGRRPLASINFVIAHDGFTLRDLVSYNEKHNMANGEDNRDGESHNRSWNCGVEG
PTDDPEINALRARQQRNILATLFLSQGTPMLAHGDEIGRTQQGNNNVYCQDSELSWVDWS
LAEENADLLEFTRKAIALRTAHPVFRRRRFFGGKPIRWGDQSLDIAWLTPAGVEMTSADW
DSGFGKSLAVFLNGKGLGEKDERGEWVVDDSFFICFNAHYEPIDFHLPPEQYGLEWVGEL
DTTHPTGDSDLTAACRDSVTVGGRSVLVLRKTS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtctccgaaggtgggcagtaccgcttcgccaaccgcgggtgaacaaccggat
ccgggtacgagcgacaccccgccgctccccatgccggacgacccggtccaggccgacgca
ctcgtcgaacccgaacccgcaccgatcccggtgtggccgggcaccccgtacccgctcggg
gcgacctacgacggtgcgggaaccaacttctcgctgttctccgaggtcgccgaagccgtc
gagctgtgcctcatcgaccgggacggcaaggaacgtcgcatccgtctcgaagaggtcgac
ggctactgctggcactgctacctgccgaacgtggtgccgggacagttctacggcttccgc
gtgcacggcccctacgacccctcccgcggactgcgatgcgacccgagcaagctgcttctc
gacccgtacggcaaggctttccacggcgacttcgacggtgacgcctcactgttctcctac
cccctgccgacgcccgacgacgcggagggcccgcccgaggaccccaccgaggaacctgtg
gcggacgccgacgcttcggaggtcgacgcggcagaggacgaggccgcacccgaggccacc
gacggcgaggtcgccgaggccaccgacgatgcggaaacggttgaactcgaacctcttccg
gagaacccgcccgctcccgagcacccgatgcccgggctcgactcgctcgggcacacgatg
gtctcggtggtcatcaacccgtatttcgactggcagaacgaccgctcgcccaatcgcccc
taccaccagacggtcatctacgaggcccacgtcaagggcatgaccgccacccatcccggc
gtgcccgagaacctacgcggcacctacgcgggcctctgccatccggtgatcatcgatcac
ctgaagtcgctgggtgtcaccgcgatcgaactgatgccggtccaccagttcatgcaggat
ttcaccctccgcgaccaggggttgcgaaactactggggatacaacaccttcggattcctc
gcgccgcacatcgagtactcgtcgaccccggatcaacccgccagcgcggtcaccgagttc
aaggcgatggtccgcgaattccacaacgcgggcatcgaggtcatcctcgacgtggtctac
aaccacaccgccgagggcaaccacctgggtccgacggtctgcttccgcggcatcgacaac
gcggcctactaccgcctcgtcgacggcgagcccgagatgtacatggactacacgggtacc
ggcaacagcctcaacggccggcatccgcacacgctgcagctgatcatggactcgctgcgc
tactggatcctggagatgcacgtcgacggattccgcttcgacctcgcctccacgctggcc
cgcgaactccacgacgtcgaccgcctctcggcgttcttcgatctggtgcaacaggatccg
gtcgtgagccaggtcaagctgatcgccgagccgtgggacatcggcgagggcggttatcag
gtcggcaacttcccgccgttgtggaccgagtggaacgggaagtaccgcgacacggtgcgc
gactactggcgcggcgagccgtcgacgctgggcgagttcgcctcccggctcaccgggtcg
tcggacctctacgcggcgaccggccggcggccactcgcgagcatcaacttcgtcatcgcc
cacgacggcttcacgctgcgcgacctggtgtcgtacaacgagaaacacaacatggccaac
ggtgaggacaaccgcgacggcgagagccacaaccgatcctggaactgtggcgtcgagggc
ccgacggacgatcccgagatcaacgccctgcgtgcccggcaacagcgcaacatcctggcg
acgctcttcctgtcgcagggcacgccgatgctggcccacggtgacgagatcggccgcacc
cagcagggcaacaacaacgtgtactgccaggactccgaattgtcctgggtggactggtct
ctcgccgaggagaacgccgatctgctggagttcacccgcaaggccatcgcgctgcggacc
gcgcatccggtgttccgccgtcgacgcttcttcggcggcaagccgatccggtggggcgat
cagtccctcgacatcgcgtggctcacacccgccggtgtggagatgacgtccgcggactgg
gacagcggcttcggcaagagtctcgcggtgttcctgaacggaaaggggctcggcgagaag
gacgaacggggtgaatgggtcgtcgacgactcgttcttcatctgcttcaacgcccactac
gaacccatcgacttccatctaccgccggaacaatacggcctcgagtgggtcggtgaactc
gacaccacccatccgaccggcgactcggatctgaccgccgcctgccgagattcggtgacg
gtcggcggccggtccgtgctcgtcctgcggaagacgtcctga
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