Gordonia alkanivorans: C5O27_12790
Help
Entry
C5O27_12790 CDS
T05876
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
gav
Gordonia alkanivorans
Pathway
gav03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C5O27_12790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gav03019
]
C5O27_12790
03009 Ribosome biogenesis [BR:
gav03009
]
C5O27_12790
Messenger RNA biogenesis [BR:
gav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C5O27_12790
Ribosome biogenesis [BR:
gav03009
]
Eukaryotic type
Pre-60S particles
RNases
C5O27_12790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZZ81841
LinkDB
All DBs
Position
complement(2821074..2821673)
Genome browser
AA seq
199 aa
AA seq
DB search
MQDKLVWIDCEMTGLRLESDKLIEIAALVTDGDLNILGDGVDVVIHADDAALASMPDVVT
KMHADSGLTEEVRASTVTLAEAEKMVLDYIRKHVTSPGAVPLAGNSIATDRGFIARDMPE
LDAYLHYRMVDVSSIKELCRRWFPKVYFGQPDKGLAHRALADIRESIRELRYYRAAAFVP
APGPDVDALANIVKDLGPA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggacaaactggtgtggatcgattgcgagatgaccggcctccgactcgagtcggac
aagttgatcgagatcgcggccctggtcaccgacggtgacctcaacatcctgggtgacggc
gtcgacgtcgtcatccacgccgacgacgcggctctcgcgtcgatgcccgacgtcgtgacc
aagatgcatgccgattccggtctcaccgaagaggtacgcgcgtccaccgtcaccctcgcc
gaggccgagaagatggtgctcgactacatccgcaagcacgtgacgtcgcccggtgccgtc
ccgctggccggcaactcgatcgccaccgaccgcggcttcatcgcccgcgacatgcccgaa
ctcgacgcctacctgcactatcggatggtcgacgtcagttcgatcaaggaactgtgccgc
cgctggttcccgaaggtgtacttcggccagcccgacaagggcctcgcccatcgtgccctc
gccgacatccgtgaatcgatccgcgagctccgttattaccgtgcagccgccttcgtgccg
gctcccggccccgacgtcgatgcgctcgcgaacatcgtcaaggatctcgggcccgcctga
DBGET
integrated database retrieval system
