KEGG   Gordonia alkanivorans: C5O27_13210
Entry
C5O27_13210       CDS       T05876                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
gav  Gordonia alkanivorans
Pathway
gav02024  Quorum sensing
gav03060  Protein export
gav03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:gav00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    C5O27_13210
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C5O27_13210
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C5O27_13210
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gav02044]
    C5O27_13210
Enzymes [BR:gav01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     C5O27_13210
Secretion system [BR:gav02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   C5O27_13210
  Eukaryotic Sec-SRP protein
   C5O27_13210
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 cobW CbiA MeaB AAA_24 AAA_31 APS_kinase Zeta_toxin nSTAND3 TctA ArsA_ATPase CLP1_P NPHP3_N AAA_18 AAA_16 AAA_33 Thymidylate_kin TsaE MobB AAA_30 6PF2K ATP_bind_1
Other DBs
NCBI-ProteinID: AZZ81908
LinkDB
Position
2913228..2914787
AA seq 519 aa
MFDSLSDRLTGALKDLRGKGRLSDADIDRTCREIRLALLEADVSLPVVRAFIARIKERAK
GAEVSAALNPAQTVVKIVNEELIGILGGETRRVRFAKNPPTVIMLAGLQGAGKTTLAGKL
GNWLKQQGHTPLLVACDLQRPGAVSQLQIVGERAGVPVFAPHPGTGVGGEGTLGVTSGDP
VSVARAGVEEAKAKHYDVVVIDTAGRLGIDAELMKQASDIRDATTPDEVLFVVDAMIGQD
AVTTAEAFADGVGFTGVVLTKLDGDARGGAALSVREVTGQPIMFASSGEKLEDFDVFHPD
RMASRILGMGDVLSLIEQAEQHWDAEQAEAAAAKITQGELTLEDFLEQMLMIRKMGPIGN
ILGMLPGAGQMKDALSQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVTV
SEVNQLVDRFFEARKMMAQMSGRMGMGGMNRKSNRKGKKGKKGKGRGPTPPKVRGGFPGM
PGGMPAGFPDLSNMPAGLDQLPPGLEGIDVSQFQPKKKK
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgttcgattccctctccgaccggttgaccggtgccctgaaggacctccgcggcaagggg
cggctctccgatgccgacatcgaccgcacctgccgcgagatccggctcgccctgctcgag
gccgacgtctcgctgccggtggtgcgcgccttcatcgcgcggatcaaggaacgggcgaag
ggtgcggaggtctccgcggcgctgaacccggcccagacggtcgtcaagatcgtcaacgag
gaactcatcggcatcctcggcggcgagacccgccgggtgcggttcgcgaagaacccgccc
acggtcatcatgttggccggtctgcagggcgccggtaagacgaccctcgccggcaagctg
ggcaactggctcaagcagcagggacacacgccgctgctggtggcctgtgacctccagcgt
ccgggcgcggtctcgcagctgcagatcgtcggcgagcgtgcgggcgtgccggtcttcgcg
ccgcaccccggcacgggcgtcggcggcgagggaacactcggcgtcacctccggcgacccg
gtctcggtcgcccgagccggtgtcgaggaggcgaaggccaagcactacgacgtcgtcgtc
atcgacaccgcgggccgcctcggtatcgacgccgagcttatgaagcaggcctccgacatc
cgcgacgccaccacgcccgacgaagtgctgttcgtcgtcgacgcgatgatcggtcaggac
gcggtcaccaccgccgaggccttcgccgacggcgtcggtttcaccggtgtcgtgctgacc
aaactcgacggcgacgcccgcggcggtgccgccctgtcggtacgcgaggtcaccggtcag
ccgatcatgttcgcgtcctccggcgagaagctcgaggacttcgacgttttccaccccgac
cgcatggccagccggatcctcggcatgggcgacgtgctcagcctcatcgagcaggccgag
cagcactgggacgccgagcaggccgaggccgccgcggccaagatcacgcagggtgagctg
accctcgaggacttcctcgaacagatgctgatgatccgcaagatggggcccatcggcaac
atcctgggcatgctccccggcgcgggccagatgaaggacgcgctgtcgcaggtcgacgac
aagcagctcgaccgggtccaggcgatcatccgcggcatgacccccgccgagcgggacaac
ccgaagatcatcaacgcctcgcgccgcctgcgtatcgccaacggttcgggcgtgaccgtc
agtgaggtcaaccagctcgtcgaccgctttttcgaggcccgcaagatgatggcccagatg
tcggggcgcatgggcatgggcgggatgaaccggaagtccaaccgcaagggcaagaagggg
aagaagggcaagggacgcggtcccacgccgccgaaggtgcgcggtggcttcccggggatg
ccgggtggtatgcccgccggcttcccggacctgtccaacatgcccgccggactcgaccag
ctgccgccgggcctcgagggcatcgacgtctcccagttccagcccaagaagaagaagtag

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