Gordonia alkanivorans: C5O27_13545
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Entry
C5O27_13545 CDS
T05876
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gav03021
]
C5O27_13545
03009 Ribosome biogenesis [BR:
gav03009
]
C5O27_13545
Transcription machinery [BR:
gav03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
C5O27_13545
Ribosome biogenesis [BR:
gav03009
]
Prokaryotic type
rRNA transcription factors
C5O27_13545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_5
NusA_N
KH_1
KH_2
KH_NusA_C
S1
Motif
Other DBs
NCBI-ProteinID:
AZZ81962
LinkDB
All DBs
Position
2981174..2982184
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AA seq
336 aa
AA seq
DB search
MNIDIGALRMIEADKGISIETVITAIETALLTAYRHTDGFAPHARVDINRKSGAVRVMAQ
ELDQNGDVVHEWDDTPEGFGRIAATTARQVILQRLRDAENEKNFGDLVAHEGEIVGGVVQ
QDSRANARGMVVVQIGSDANSTEGVIPPAEQVPGEVYTHGDRIKCYVVGVSRGPRGPQIT
LSRTHPNLVRKLFSLEVPEIEDGSVEIVAVAREAGHRSKIAVHTGVAGLNAKGACIGPMG
QRVRNVMSELAGEKIDIIDFDSDPGVFVGNALSPAKVVSVTVVDEAAKAARVVVPDYQLS
LAIGKEGQNARLAARLTGWRIDIRSDAAPAVEGGPE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcgacatcggcgcactgcgcatgattgaggccgacaagggcatctcgatcgag
acggtcatcaccgccatcgagaccgccctgctgaccgcctaccgtcacaccgacggcttc
gcgccgcatgcgcgtgtcgacatcaaccgcaagtccggtgcagtccgcgtgatggcacag
gaactcgaccagaacggtgacgtcgtccacgagtgggacgacacccccgagggcttcggc
cggatcgcggccaccaccgcacgccaggtcatcctgcagcgcctccgcgacgccgagaac
gagaagaacttcggcgacctggtggcacacgagggcgagatcgtcggcggcgtggtgcag
caggactcccgcgccaacgcccgcggcatggtcgtggtgcagatcggcagcgatgccaac
agcaccgagggcgtcatcccgcccgccgagcaggtacccggcgaggtctacacccacggc
gaccgcatcaagtgctacgtcgtcggcgtcagccgcggcccccgcggaccgcagatcacg
ctgtcgcgtacccacccgaacctggtccgcaagctgttctcgctcgaggtgcccgagatc
gaggacggttcggtggagatcgtcgcggtcgcccgcgaggccggccaccggtccaagatc
gccgtgcacaccggtgtcgccgggctcaacgccaagggcgcgtgcatcggcccgatgggt
cagcgtgtgcgcaacgtcatgagcgaactggccggcgagaagatcgacatcatcgacttc
gattccgatcccggtgtgttcgtcgggaatgctctgtccccggcgaaggttgtatcggtc
accgtggtcgacgaggccgcgaaggcggcgcgggtcgtcgtgccggactatcagctctcc
ctcgccatcggcaaggaagggcagaacgcccgtctggccgcccggctgaccggttggcgg
atcgacatccgctccgacgcagcccccgcggtcgaggggggacccgagtga
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