Gordonia alkanivorans: C5O27_13810
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Entry
C5O27_13810 CDS
T05876
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
gav
Gordonia alkanivorans
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gav03016
]
C5O27_13810
Enzymes [BR:
gav01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
C5O27_13810
Transfer RNA biogenesis [BR:
gav03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
C5O27_13810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
B12-binding
PDZ_6
Motif
Other DBs
NCBI-ProteinID:
AZZ83752
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Position
3032010..3033578
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AA seq
522 aa
AA seq
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MSDRPDQAASAPGPLGDQAPRSYQVRTYGCQMNVHDSERISGLLEDAGYVRAGEDDDADL
VVFNTCAIRENADNKLYGNLSHLAPVKSQRPGMQIAVGGCLAQKDKDTVIAKAPWVDVVF
GTHNIGSLPALLDRARHNEEAQVEILDSLERFPSTLPAKRDSAYSGWVSVSVGCNNTCTF
CIVPSLRGKEVDRRPGDVLAEVRALVDQGVVEVTLLGQNVNAYGMSFADPDQPRNRGAFA
ELLRACGDIEGLERVRFTSPHPAEFTDDVIEAMAETPNVCPQLHMPLQSGSDRILKAMRR
SYRQTRFLGILDKVRAAMPHAAITTDIIVGFPGETEEDFQATLDVVERARFSSAFTFQYS
PRPGTPAATMPDQVPADVVGERYQRLIALQERICLSENESLTGTEVELLVVADEGRKSAE
TRRMTGRARDGRLVHFAPGDTAGIRPGDVIHTVVTAAAPHHLIADAGVLSHRRTRAGDAH
EQSRTPTTAPVGVGLGLPTIGPPVPTPATAAAPASAGCGSCG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
ttgtcggatcggcctgaccaggctgcatcagccccaggccccctcggcgatcaagcaccc
cgcagctaccaggttcgaacctacggctgccagatgaacgtccacgactccgaacgcatc
tccgggctcctcgaggacgcgggttatgtgcgtgccggcgaggacgacgacgccgatctg
gtggtgttcaacacgtgtgccatccgcgagaacgccgacaacaagctctacggcaacctg
tcgcacctggccccggtgaaatcccagcggcccggcatgcagatcgccgtcggcggttgc
ctcgcgcagaaggacaaggacaccgtcatcgccaaggcgccgtgggtcgacgtcgtgttc
ggcacccacaacatcggctcgctgccggcgctgctcgaccgtgcccgtcacaacgaggag
gcgcaggtcgagatcctcgactccctggagcgcttcccgtcgacgctgcccgccaagcgc
gactcggcctactccggttgggtgtcggtgtcggtgggctgcaacaacacttgcaccttc
tgcatcgtgccgtcgctgcgcggcaaggaggtcgaccgccgacccggtgacgtgctcgcc
gaggtccgggcactcgtcgaccagggtgtcgtcgaggtgacgctgctcggtcagaacgtc
aacgcctatggcatgtccttcgccgatccggaccagccgcgcaaccgcggcgccttcgcc
gaactgctgcgtgcctgcggcgacatcgaaggactcgaacgggtccggttcacctcgccg
catcccgccgagttcaccgacgacgtcatcgaggcaatggccgagacccccaacgtgtgc
ccgcagctgcacatgccgctgcagtccggctccgaccgcatcctgaaggcgatgcgacgc
agctaccgccagaccaggttcctcggcatcctcgacaaggtccgcgcggcgatgcctcat
gcggcgatcaccaccgacatcatcgtcgggttcccgggggagaccgaggaggacttccag
gcgaccctcgacgtcgtggaacgcgcccggttctccagcgccttcaccttccagtactcg
ccgcgcccgggaaccccggccgcgacgatgcccgaccaggtgcccgccgacgtcgtcggt
gagcgctaccagcgactcatcgcgctgcaggaacgaatctgcctgtccgagaacgaatcc
ctgaccggcaccgaggtggaactgctcgtcgtcgccgacgagggacgcaagtccgccgag
acccggcggatgaccggtcgcgcgcgggacggacgcctggtgcacttcgcgcccggcgac
accgcgggcatccgacccggcgacgtgatccacaccgtggtcaccgcggccgcgccgcac
cacctgatcgccgacgccggggtgctctcgcaccgccgcacgcgcgccggcgacgcccac
gagcagagccgcacgcccacgaccgcccccgtcggagtcggcctcggcctgccgacgatt
ggtccccccgtacccacccccgccaccgccgctgcacccgcgtccgccggatgcggctcc
tgcggctag
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